Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g01979 | ATGGCTTCCTGTGACGACGACTTCTCTCTCCTCAACGACGATCACCACCACCAACACCACCACCAATCCACTACCAACCACCACCATGTACCCACGCCTCACCACATCCATCAATCCTACACATCTCACCGCTTCACGCCTCGATCGTCTTCCGTTCACGCGCCGCCACAGCCCTCTCCCAATCAACCGGCTCAACCGATTCTTGCACCCTCCGGAAGTCCGAAGAAGATCGGTGGCCCGATAGACGAGGAAGAGGAGGAGGAGGATACGGAGGATTATGGTGATCCTGCTTTCTGCTCCAGTTCGTTTGATAATGGAGATCCCAACCGGCTTGGTGTTGGTGTTGATGTGCGGGTTGAGAAGAGGAAGGATCAGTCGGACGAGCTTGCGGAGGAAGGAGGTTCTTATACTAGTTATAAAAGAGCGAAACCTTCCTCCAGCGGCGGAGAATACAGGAAGGATCGAGAGGAGTGGAGTGATGCGGCTATTTCCTGCCTTCTGGATGCGTATACCGAGAAATTTACGCAGCTGAATAGGGGGAATTTGAGGGGGAGGGATTGGGAGGAAGTGGCTGCAACTGTCAGTGAACGGTGCGAGAAGCAGAGCAAGAGCGTAGAGCAGTGTAAGAATAAGGTCGACAACTTAAAGAAGAGGTATAAGTTAGAGAGACATAGGATGAGTAACGGTGGCGTCTCGATCAGTCACTGGCCTTGGTTTAAGCAGATGGAGCAAATTGTTGGAAATTCTTTGACAATGAAGGTTGTTTCTGATGAGGATCGGAGTGTTGCCTCCTCAGGGAATACTCCGAGGATATCAAAGAGGTACGTTCTTCCCACACCCAATACCGCTGGTCAAATGAATAACATAAAACCCAAAGCAGTTACCAGTCCAAGGTGGCGAAGAGTTGTCTTTAAAATCAGTGGTACGGCTCTTGCAGGGACTGGTCCTAACAACATCGATTCAAAGGTTGCAATGGCAATTGCCAGAGAAGTTGTAATGGCTTGTCGCCTGGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAACTTCTTCTGTGGAGACTCTTGGGTGACTACAACAGGTTTAGATAGATGTACAGCATACCAAATTGGGTACGTTTTCACACACCACCTTGTTGATACTAAATCTGGATCCTCTTTCTCATTATATAGTCAGCCGATTTTACTACATTGA | 1194 | 49.08 | MASCDDDFSLLNDDHHHQHHHQSTTNHHHVPTPHHIHQSYTSHRFTPRSSSVHAPPQPSPNQPAQPILAPSGSPKKIGGPIDEEEEEEDTEDYGDPAFCSSSFDNGDPNRLGVGVDVRVEKRKDQSDELAEEGGSYTSYKRAKPSSSGGEYRKDREEWSDAAISCLLDAYTEKFTQLNRGNLRGRDWEEVAATVSERCEKQSKSVEQCKNKVDNLKKRYKLERHRMSNGGVSISHWPWFKQMEQIVGNSLTMKVVSDEDRSVASSGNTPRISKRYVLPTPNTAGQMNNIKPKAVTSPRWRRVVFKISGTALAGTGPNNIDSKVAMAIAREVVMACRLGVEVAIVVGGRNFFCGDSWVTTTGLDRCTAYQIGYVFTHHLVDTKSGSSFSLYSQPILLH* | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25656126 | 25658507 | - | Chy4G086970.1 | Chy04g01979 | 225878 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g01979 | 397 | MobiDBLite | consensus disorder prediction | 16 | 154 | - | - | |
Chy04g01979 | 397 | Gene3D | - | 290 | 386 | IPR036393 | - | |
Chy04g01979 | 397 | PANTHER | URIDYLATE KINASE | 1 | 373 | - | - | |
Chy04g01979 | 397 | Pfam | Myb/SANT-like DNA-binding domain | 155 | 245 | IPR044822 | - | |
Chy04g01979 | 397 | PANTHER | ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN | 1 | 373 | IPR011817 | GO:0006221|GO:0009041 | |
Chy04g01979 | 397 | MobiDBLite | consensus disorder prediction | 114 | 130 | - | - | |
Chy04g01979 | 397 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
Chy04g01979 | 397 | Gene3D | - | 158 | 221 | - | - | |
Chy04g01979 | 397 | SUPERFAMILY | Carbamate kinase-like | 297 | 374 | IPR036393 | - | |
Chy04g01979 | 397 | Coils | Coil | 198 | 225 | - | - | |
Chy04g01979 | 397 | MobiDBLite | consensus disorder prediction | 35 | 52 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01043 | Chy-Chr2:7148999 | Chy04g01979 | Chy-Chr4:25656126 | 4.84E-22 | dispersed | |
Chy04g01979 | Chy-Chr4:25656126 | Chy12g00092 | Chy-Chr12:940983 | 1.50E-20 | dispersed | |
Chy04g01979 | Chy-Chr4:25656126 | Chy12g00091 | Chy-Chr12:933407 | 1.41E-20 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17930 | PF13837 | Myb_DNA-bind_4 | 3.50E-20 | CL0123 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g01979 | - | - | csv:101222460 | 721.465 |