Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01984 GACACTGCAGCGGAGAAGGCGAGGGAAGCGAAGGATGCGGCGGCGAGAAAAGCAGAGGAATACAAAAATTACACTGCGGAGAAGACGGCGGAGGCTACAGGTAAGGCCGGCGAGTATAAGGACACTGTAGCGGAGAAGGCGAGGGAAGCTAAGGATGCAGCAGCGAGAAAAGCAGAGGAATATAAAGATTACACTGGGAAGAAGACGGTGGAGGCTACAGAAGCCGCTAAAGGAAAGGCTGGTGAGTATAAGGACGCTGCAGCGGAGAAGGCGAGGGAAGCTAAGGATGCTGCAGCAAGAAAAGCAGGGGAATACAGAGATTACACAGCTGAAAAGGCGAGGGGAGCAACGGAAGCGGTGAAGGAGAAGGCTGGTGAGTACAAGGATTATGCAGCGGAGAAGGCAAATCAAGCGAAGGAGAAGGCGGCGGAGTATAAGGATTACACAGTGGATAAGGCGAAGGAGACGAAGGATGCGGCGGCAAGAAAAACAGTAGAGTATAAAGACTATGCAGCGGACAAAGCGAGAGAGACGACAGATTACACGGCAGAGAAGGGGAAAGAAGGGAAGGACACGACAGTGAGCAAACTTGGGGAACTGAAAGATTCAGCAGCGGATGCTGCAAAGAGAGCAATGGAATACTTTACCGGAAAGAAAGAGGAAATCAAGGAGGGAGCATACGAAACAAAAGATGTCGCTAAGGAAAAGATGGGCGAATCAGAGGAGGATACAAGAAGGAAAATGGAGGATTTAAGGCTGCAGGGAGAAGGAACGAGGGGCAGCACAGAAGCAGCAAAAGTCACACTTGAACGTAATAGAGGCCGTGGCGGGGAGGGAGCGGTGGTGGTAGATTTGGAGGAGACACGACCGGGTGCGCTGGCCTCGACTTTGAAGAAGGCAGACGACATGGCAGCACAGACGTTTAACGATGTGGGTCGAATTGACGACGAGGAGTTTAACGATGTGGGTCGAATTGACGACGAGGAGGGAGCTGCGCGCTCAAAGGATCGTCAAGGGAAGATGTGA 1026 52.14 DTAAEKAREAKDAAARKAEEYKNYTAEKTAEATGKAGEYKDTVAEKAREAKDAAARKAEEYKDYTGKKTVEATEAAKGKAGEYKDAAAEKAREAKDAAARKAGEYRDYTAEKARGATEAVKEKAGEYKDYAAEKANQAKEKAAEYKDYTVDKAKETKDAAARKTVEYKDYAADKARETTDYTAEKGKEGKDTTVSKLGELKDSAADAAKRAMEYFTGKKEEIKEGAYETKDVAKEKMGESEEDTRRKMEDLRLQGEGTRGSTEAAKVTLERNRGRGGEGAVVVDLEETRPGALASTLKKADDMAAQTFNDVGRIDDEEFNDVGRIDDEEGAARSKDRQGKM* 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25688225 25689459 - Chy4G087020.1 Chy04g01984 225883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01984 341 PANTHER DAUER UP-REGULATED-RELATED 139 320 - -
Chy04g01984 341 PANTHER DAUER UP-REGULATED-RELATED 99 179 - -
Chy04g01984 341 PANTHER DAUER UP-REGULATED-RELATED 2 117 - -
Chy04g01984 341 Gene3D - 107 139 - -
Chy04g01984 341 Gene3D - 60 106 - -
Chy04g01984 341 Gene3D - 1 38 - -
Chy04g01984 341 Gene3D - 140 185 - -
Chy04g01984 341 Coils Coil 4 27 - -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 1 32 IPR004238 -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 107 144 IPR004238 -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 32 61 IPR004238 -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 146 188 IPR004238 -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 179 218 IPR004238 -
Chy04g01984 341 Pfam Late embryogenesis abundant protein 62 105 IPR004238 -
Chy04g01984 341 MobiDBLite consensus disorder prediction 314 341 - -
Chy04g01984 341 MobiDBLite consensus disorder prediction 98 123 - -
Chy04g01984 341 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 2 117 - -
Chy04g01984 341 Coils Coil 44 64 - -
Chy04g01984 341 MobiDBLite consensus disorder prediction 230 256 - -
Chy04g01984 341 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 139 320 - -
Chy04g01984 341 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 99 179 - -
Chy04g01984 341 MobiDBLite consensus disorder prediction 230 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01984 - - csv:101221754 500.36