Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01987 ATGGCAAATACATCCTCGAAGACCGGTAATTTTGAGCCAATGTTTTTGAAAGTTGGGATTCCCTTAGCTATATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAAGGTTCCTTTGCATCTTCCTTAAATCTCTTCAAACCCAAATCAAAGCTCATGGAAAATGAGAACTTTCACCCATCTTCAATCACTTCAGGGGAAGAAAAAACTTCACAACCCAATGTTGAAGAAGTGATTCTAAGCTTAAAAACCAGAGTTGAAGATCTTGAAAGTAAAGAATTGGATATAGAGAGGCAATTCATTTGGTACCAAAATCTAAAAGAAAGAGAAGCTTTATTAGTGGAGCTTAGAAACACTTTGGTTTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGAAGAAGAAAACAGGAGGTTTGAGAATTTGGTGACAGAATATTTGGGAGTCTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAGGAAACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATGATTGAGAGATTGGGGAATGAAGTAAAAGAGCTGAAAATGCAAATGGATCATCAATTGGAAGAGGAGAATAACCAAGATTTGTGCACATCAAAGAATGAAACAGAAAAAGCAGTAACAATGGAGGATTTGAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGGAAGAGGCGGCCATCTCTTTTCCCTTGTCGATGCTCCTTATCGTCGTCACAAGAAGAATCTTCAGAACAAGCTAAAGAATCGCTGGGCTACTGGCATATATTTCTGCAATGTAGCCGAGGCTGTTAGCACAAGTAGAAGGGCTTTAAGAGCATCAAAAATACCTGAAAGTGAGTTTACAACTCTCCCGAATGGTCTGAAGTACTATGACTTGAAGGTTGGAGGAGGAACTAAGGCTGTGATTGGATCCCGTGTTGCAGTTCACTATGTGGCTAAATGGAGAGGGATCACCTTTATGACAAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTACGGATTTGATGTAGGGCAATCAGAAAGAGGAACAGTCCTCAAGGGGTTGGATCTAGGTGTTCAAGGCATGAGGGTAGGAGGCCAGAGATTGCTTATAGTTCCTCCTGAGTTAGCTTACGGAAGCAAAGGGGTTCAAGAAATTCCTCCAAATGCAACAATAGAGGAAATGGAAGCCATTTCTGGAAGCAGCTTGCCTTATGGGAACAAAGCATCTAGAAAAACCTCCTTTATTGTGACCATTCAAGAGGAATCCACCAGTCTTCACTTCTGCTATTCGCAGAAAACCTGCCCAAGGTGTGGCTCTTTTGAAGTTCCTTACCCTCTAAGTACCAATCCCAACTGTGGTGACTTAGATTATGCTCTTCGTTGTGATTCTCATTCAAAAAAACTCTACTTTGATGCACTCAATGGAAGTTCATATCCTATCCTCAAAATCAATGCTTCAAGTCAACGTTTGGTCATCCAACCATCTCCATGGGTTGCTGGCTCCTGTGTTACTCAAGACATGTTGGTTGGTGAAGGCTTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAACACAATTTTCCTCTTGAACTGTTCTCCTCGCCTGCTAGTCTCGCCGCTTAATTGCACTCCTTCGAGTCTCTGTCACCACTACTTGGCAAATTCAGGACGAGTCGATGGAGAAAGAGCATTTCAGTGTGCAAGTGTTCTTGACCCTTGTTGTACCTTCATCCCTGGTGGGATGCCCTCAGCTTATAAGATAAGGCTTCATAACTCAGGTTGTAGAGCATTCAGGAGTATCCTTCATCTGGATGTGGAAAAGCCACCAAATCAATGGGAGGAAGGTTTGGAAATTCAATGGGCTACACCACCTGAACCAATCTGTAGAACTCAATCTGATTGCACTGGAGCGTCAGATTGTCTTCCTACTGGTGGTTCCAACAACCGTTCTCGCTGCCTTTGCAGAATGAGCTATTATTGGGATCATAATCTTGGAACATGCCTGAGAACCAATAAGAAGAGTTTGGTTAGACTCAGCATAAAGCTCTCGATACTGATCAGTGTAAAGCATTTCATGGAGCTCGCACTCTCCTGTTTGAGGGAGAAGAAAGTGGAAAGGCCTTGCATGAAAGATGTACTCCAAGAACTTGAACACATAACTCAAATATTGGACAATCCAGAAACAATTGCTGAAGAGGGTAATCCTTAA 2358 41.01 MANTSSKTGNFEPMFLKVGIPLAISAAGGICGIMMAKGSFASSLNLFKPKSKLMENENFHPSSITSGEEKTSQPNVEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQMDHQLEEENNQDLCTSKNETEKAVTMEDLNKLSNEFNQLKDEFEGRGGHLFSLVDAPYRRHKKNLQNKLKNRWATGIYFCNVAEAVSTSRRALRASKIPESEFTTLPNGLKYYDLKVGGGTKAVIGSRVAVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIEEMEAISGSSLPYGNKASRKTSFIVTIQEESTSLHFCYSQKTCPRCGSFEVPYPLSTNPNCGDLDYALRCDSHSKKLYFDALNGSSYPILKINASSQRLVIQPSPWVAGSCVTQDMLVGEGLWLNQSLPFNITSSNTIFLLNCSPRLLVSPLNCTPSSLCHHYLANSGRVDGERAFQCASVLDPCCTFIPGGMPSAYKIRLHNSGCRAFRSILHLDVEKPPNQWEEGLEIQWATPPEPICRTQSDCTGASDCLPTGGSNNRSRCLCRMSYYWDHNLGTCLRTNKKSLVRLSIKLSILISVKHFMELALSCLREKKVERPCMKDVLQELEHITQILDNPETIAEEGNP* 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25704524 25713615 + Chy4G087050.1 Chy04g01987 225886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01987 785 Coils Coil 250 270 - -
Chy04g01987 785 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 470 727 IPR045274 GO:0007166
Chy04g01987 785 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 349 438 IPR001179 GO:0003755
Chy04g01987 785 Coils Coil 80 100 - -
Chy04g01987 785 Pfam Wall-associated receptor kinase galacturonan-binding 481 539 IPR025287 GO:0030247
Chy04g01987 785 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 354 438 IPR001179 GO:0003755
Chy04g01987 785 Gene3D - 309 446 IPR046357 GO:0003755
Chy04g01987 785 Coils Coil 128 148 - -
Chy04g01987 785 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 729 779 - -
Chy04g01987 785 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 729 779 IPR045274 GO:0007166
Chy04g01987 785 SUPERFAMILY FKBP-like 308 438 - -
Chy04g01987 785 Coils Coil 159 200 - -
Chy04g01987 785 Coils Coil 208 235 - -
Chy04g01987 785 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 470 727 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01987 Chy-Chr4:25704524 Chy03g00145 Chy-Chr3:1318082 7.39E-62 dispersed
Chy12g01403 Chy-Chr12:18149166 Chy04g01987 Chy-Chr4:25704524 1.02E-10 dispersed
Chy04g01987 Chy-Chr4:25704524 Chy06g00870 Chy-Chr6:6281937 9.14E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01987 - - csv:101221284 556.984