Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01988 ATGGGTACCCATGGCCGAAGCAGTGAGAAGAAAAGAGAGAAGACATCATCTTCTCGGAAACGCAGCAGAAGAAGGTCCGACGACTCGGATAGTCGGGATTCATCGCCTGTAACGAGGTCCCGGAAGCGCAGGGAAAAACGCGATCCTATTAGAAGCAGTCACCGGAGTCGGCGGCGGAGCTTCTCACGTGGGCGGGATTCCGGTGATGATAGTTCAAATGATAGTTATGACAGTGCTGATGGGGGTCGTAAGAAGAGTAAGTCTTCGAGAAAAGTTACCGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTACGAGTTGCTAAGAAATTGAAGTCACAGACGGTTTCTGGTTATTCTAACGATTCGAATCCATTTGGCGACTCGAATCTGAATGAAAAATTTGTTTGGCGGAAGAAAATTGAGCGTGATGTTACTCAAGGCGTGTCACTTGATGCCTTTTCAGTGAAGGCCGAGAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGGGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTCGAGAACGTGCTCGTGCTGAATTTCAGGACTGGGAGAAAAAGGAAGAAGAGTTTCATTTTGATCAAAGCAAAGTCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCAAAGCCTATAGATGTTCTGTCCAAGCAACTGAATGGGTCAGATGATTTTGATATAGTAATTAATGAGCCATACACTGTATTCAAGGGATTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATATGGACAGGGCGACGCCTACACATATCGAGTATTGGGAGGCACTTCTGGTGGTTTGTGATTGGGAACTAGCTGAAGCTCGAAAGAAGGATGCTCTTGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTCCTGAGTTGCTTGCAGAAGAAAGGGGCCTGCATTCTAGCATTGAAACAGATGTCAAAAATCTGCTGGAAGGGAAGACATATGGTGAATTGGAGGCATTACAATCTCAAATTGAGTCACAGATGCGAACTGGAACAGCAAAGGTGGTTGAATACTGGGAGGCTGTCCTAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAAATTCATACGAAAAAACTGCATGAGCATCTTGTGCGTCTTGAGGAACCTTTAGAGGATGATGAAGAACAGCTGGATCCAGAAGTCAAGATGGAAACCGATTACTCTTTGCAAGTGAAAGCTGATGATGATGAGCATGATATTGAAGAACCCCAAACATATTCACCCAATCTCCTCGTGGAAGAAGATAATCAAGAGGCAGGATCGTTTTCACCAGAACTTATGCATGGTGATGAAGATGAAGAGGCAGTGGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAGCGTATTGCTGTCTTAGAAGAACAGCAGAGACGGGTGCAAGAAGCAATGGCTACGAAACCTTCTCCAGTAGAGGATAATTTCGAACTGAAAGCCTCGAAAGCCATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGGGCTGAAGTGAACCTGGACTCACAGGTTTATTGGTGGCATGATAAATATCGTCCAAGAAAACCAAAATACTTCAATCGGGTTCATACGGGATATGAATGGAACAAGTACAATCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTACAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATCGAAAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCATGCAGGGCCACCTTACGAGGATATTGCATTTCGAATTGTAAACAAAGAATGGGAATACTCTCACAAGAAGGGGTTCAAGTGCACATTTGAGCGTGGAATTTTGCATGTATACTTCAACTTCAAACGATATCGTTATCGTAGGTAA 2028 44.33 MGTHGRSSEKKREKTSSSRKRSRRRSDDSDSRDSSPVTRSRKRREKRDPIRSSHRSRRRSFSRGRDSGDDSSNDSYDSADGGRKKSKSSRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSVKAEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRVRDGRSKPIDVLSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDMDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPPELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRTGTAKVVEYWEAVLKRLHIYKAKACLKEIHTKKLHEHLVRLEEPLEDDEEQLDPEVKMETDYSLQVKADDDEHDIEEPQTYSPNLLVEEDNQEAGSFSPELMHGDEDEEAVDPEEDRAILERKRIAVLEEQQRRVQEAMATKPSPVEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR* 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25716007 25720378 - Chy4G087060.1 Chy04g01988 225887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01988 675 MobiDBLite consensus disorder prediction 460 482 - -
Chy04g01988 675 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 675 - -
Chy04g01988 675 Coils Coil 165 209 - -
Chy04g01988 675 MobiDBLite consensus disorder prediction 44 61 - -
Chy04g01988 675 SMART CactinC_cactus_3 551 675 - -
Chy04g01988 675 PANTHER BNAC05G02180D PROTEIN 1 675 - -
Chy04g01988 675 Pfam Conserved mid region of cactin 201 398 IPR018816 -
Chy04g01988 675 Pfam Cactus-binding C-terminus of cactin protein 551 675 IPR019134 GO:0005515
Chy04g01988 675 MobiDBLite consensus disorder prediction 1 96 - -
Chy04g01988 675 MobiDBLite consensus disorder prediction 1 43 - -
Chy04g01988 675 MobiDBLite consensus disorder prediction 62 96 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01988 K25058 - csv:101205416 1187.94