Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01990 ATGTTCAGGTTGCACAGGAACCGGCATGCGAAATCAGGGGAGAAATTTGATTTCAAATTCTCCAATTTCAAGGCCACCCAGGTGCCTAAAGGTTGGGACAAGCTATTTGTATCTGTAATTTCTGAGCAAACTGGGAAGACAATTGTCAGGTCAAGCAAAGCACCAGTTCGTAATGGAAGTTGCCAGTGGACTGAGTCTTTATCAGATTCCATTTGGGTTTCACAAGATGAAGTTTCTAAGGAGTTTGAGGATTGTAATTTCAAGCTTGTTGTGGCCATGGGGTCAGCAAGATCTAATATTCTTGGAGAGACTATGGTCAACATGACAAATTACATAGATTCCAAATCTTCTTCTGCAGTCTCACTTCCACTGAAAAAGTGCAACCATGGAACTATTTTACAAGTGAAAATCCAGTGCTTAGCTCCAATATCAAAAGTAAGGAGTGGAGAATTTAAACATACAGATTCTCCAAAACAAGCCTTGAAAAAGGAAGGTCATGACTCAGATAGCTGCTCTGATATAACAGATAGCCAATTGTCGAGAAGTATTGGATCTTCTTCTGGTGCAGATTTATACTCTAGTTTACACTCCGGAGAAGCTAGCAGCAAGGAAGCAAGTTTCTCTGCTTCCTATTCACAGATCAGCAATTCGTCATCTGAGGTTTATGAATCCGTAGAGAATGACGCTGCAAAAAACAATTATAGTGATATTCAAAGACAAGATTCGGTGAGCTCACAGAATAGTGCTCCTTGTTTATCTCCTAATTCTGTAATTACTGGTTCAGCACCAGAAGCAACGACTATTGAGGAACTTCGGCAGCGACTGCAGTTGAAGAAAGAGTTTTCAGATCAATCTGAAAATCAGGAAAGTTTACATGCTGCACTTTCTGCAGCGACTGCAGAATGTGATGGTTTGAGAAAAGAACTTGAGCAACTGAAATTGGTGACTGAGAAGTCAACACAGAGACGGACAAGCATTGAGGATTTATCATATCAGGATGGGGAACCACACATCCTAAATGAATTGAAGGATGAACTGAACTTCCAAAAAGAAACCAATGCTGATTTAGCTCTGCAGCTAAAGAGAAGTCAAGAATCAAATATTGAGCTTGTGTCCGTTCTTCAGGAGCTAGAAGCAACTACAGAAAAGCAGAAACTTGAGATAGAGGAACTTTTGGCACGGCACCAAAAAGATGATGATATCGAAAATATTAATAAAGAAAACAAGAAATTGGTGCTTCATTTAGAGCATGTGAAGGAATCAGAGAAAAATCTTCAATTGAAGGTTGGGGTTCTGGAGAGAAACTTGGAGGAAGCAAAATTTGATTTACAGAAATCTGAGGTCTCAAATCAAAGATTCCCTCAGGATACTGAAAGGCAATCCGATAGTCTGCTAAATTCTGAGGAAAATGTGGGGTCCTTACATTATGTAAACATAAATCTAGTGAAAGAAATTGAAATGTTGAAAGAAAAAGTGCAGGAGTTAGAGAAGGATTGTAATGAATTGACAGATGAAAACATAGATCTCTTGTACAAGCTTAAGCAAGCAAATAGCGACTCTAAGGGGGGAAGTTTGGCTCTTAACTCCACAGGTGATGAGCTTCTATCTAAATCTTTTGTTAATTTTGGATTTGAATCTATGAAACACAGACATTCTGAACAAATTTCAGAAGAAAAAATTGAGAAAAATCCTAATGTGATTGAGAATAACGATTTCAATAAAAAACCAGAGAGTATGCAATTTGAGCTGGAAATCATAGTCGAAGAGCTCAGTAGGGAATTAACTTTGAAAAAGCTGGAGATTGAAAAACTTGAGTCCAGCATTTTATCCAAAGATGACGAGATTAAGATCCTCGAAGGTTTGCATAACAAATTGCAAGCTAAGTATTCTGATCTCCAGAAAGAAAAAAATCAGATCGATGAAAAGATGATGGAAGTCATGCTTGGAGAAAGTGATAGCAGTTCTAAATGCTTAAATGGTCTGCGAAATGAAGTAAAGGCGCTTAGCAACAGTGTGGATTTGCATGTTTCTGCAAACAAGATTCTTGAAAGTAAATATTCAGAGCTTCAATTTAAAAAACAAGAACTTGATCTCCATGTATCTCAAATTGAACAGGAACGCATACGGTTGTCAGAAAGCATATCTGTTTTGGAATCTCAACTAAAATACATGATGGGCGAGAAGCAGTCAATTCGCCTTGAGTTAGAAGACTCTAAGTCTCATGCTGTGGGTCTCCAAGATGAGTTTGATAAACTGAGACTCGAGATAGAGACAGCAAATGTTGATTTGAAACAAATGTTGAATGACTTGCAAAACCAGTGTGCAAAGGCTCAAGATCAATGTGAGTACCTGCAGAGAGAAAAAACGAAGTTGGAGGCTGCAGCTGAGCATCTCGTTGAAGAACGAAATTTGCTTAAAAAATCAAATGGAGAGCTGAAGAACAAGAATTTCGAGTTGCATGAGGGTTATTTCCGCTTGGAATCGAAAGTGAAGGAATCGCTTGAAAGGTCTGCACTGTATTTCAGAAGAATTGACGATTTCGAAGATTATCTCTCTCTTGGGTTGGAGGATATCGCATCAAACGAAAGATTCCTATCTTCGGAATTAGATTCAATCGTTGAAGAGAACATAAAATACAAAGAGAAACTTGCTATGTTCGAAAGCTTGTCTAGTGAAACATATTGGGAGAAGGCAACTGAAGCTCAAGAACTTCATGGAGCCGTTGTGCATCTGACCAAGCAACTTTCAGCAGCCAAGAAGGATTTCAACATCATGCGAATGGAATCTGATGAAAATTTAACGGCTCTGATTAGTGAGCTTTCCGTGTCAAAACAAAACCAAGAGACACTGATAGCTGACAATGAAAAGTTACTGAAGCAGTTGGAAAATTACAAATCACTTGAAGTTGAACTTAAGAACTCTGTCAATGACCTTGAACTACAGCTATATGTTTCTGAAAAAGAAAGAAGGCAGAATGAGGAAGACTTAACTAACTTTAAAGTTCAGTTGCAAAAAACAGCCCATTTTCAGGATGAGGTTTTTGCATCGAGCAATAGGCTTGAACAGAAAACTGCTGCTGAATTAGAAGACAGCAAACAGAGCGGAATTGCCTTGGAAGAAAAGCTTCTGAGAATAGGGAGTGGGTCAGTAGTGGAAGAGACATCATTTCCAGGGATTGATGATTTAAGAAATGAGCTCTGCGAGATTAAGAAAATGAACAGTAAGTACCAACAGAAACTGAAAATACTTGAGGAGGAGAAAGATGGGTGCCTAAAAAGATCTCAATCCCTTGAAGCTGAACTGAAACATTTAAAAGAAGAAAAACAGATCCAACGGGAGTCTAGCAGTGTAAGGATTCATAGTCTTTCCAAAACCAACGACAAAAACATGCCCAGTAAAGACATGAAGCTTCTAAAAAATGGTGCGGTAAAGACAGTTGGTCAAAATCACAGTGGGAAGAAGAAGCCTAAGGACCCTAACAGCAATCAATCTCAATCTCAAATTAAGTCTCGACAGGATGATAGTGGATGTGATATTGATGATGAAGGGCCTCACGTTCCTGAAGCTAAATCAATTTCAAGAATTCAGATGCTCGAAAAAGAACTTGCTGAGGCTTTGGAAGCAAACAAGAAATATGAAGATCAGCTGAGCAGGCTTGTTTCAGACACTCAAAACAACAAAGAAAATTCTCCCACATCAACAGTTGAAGGCGACGTTGTAAAGACAAAGGAAGGATACGAAAGCCTTAACTCGGATCTAGAGGCGGAGTTAAAAGACATTCGTGAGCGGTACTTCCACATCAGCCTCAAGTATGCAGAAGTCGAGCATCAGCGAGAGGAACTTGTTATGAAGCTCAAAGCAGCCAAGAACAGCGGAAGAAGGTGGTTCTCATGA 3894 39.09 MFRLHRNRHAKSGEKFDFKFSNFKATQVPKGWDKLFVSVISEQTGKTIVRSSKAPVRNGSCQWTESLSDSIWVSQDEVSKEFEDCNFKLVVAMGSARSNILGETMVNMTNYIDSKSSSAVSLPLKKCNHGTILQVKIQCLAPISKVRSGEFKHTDSPKQALKKEGHDSDSCSDITDSQLSRSIGSSSGADLYSSLHSGEASSKEASFSASYSQISNSSSEVYESVENDAAKNNYSDIQRQDSVSSQNSAPCLSPNSVITGSAPEATTIEELRQRLQLKKEFSDQSENQESLHAALSAATAECDGLRKELEQLKLVTEKSTQRRTSIEDLSYQDGEPHILNELKDELNFQKETNADLALQLKRSQESNIELVSVLQELEATTEKQKLEIEELLARHQKDDDIENINKENKKLVLHLEHVKESEKNLQLKVGVLERNLEEAKFDLQKSEVSNQRFPQDTERQSDSLLNSEENVGSLHYVNINLVKEIEMLKEKVQELEKDCNELTDENIDLLYKLKQANSDSKGGSLALNSTGDELLSKSFVNFGFESMKHRHSEQISEEKIEKNPNVIENNDFNKKPESMQFELEIIVEELSRELTLKKLEIEKLESSILSKDDEIKILEGLHNKLQAKYSDLQKEKNQIDEKMMEVMLGESDSSSKCLNGLRNEVKALSNSVDLHVSANKILESKYSELQFKKQELDLHVSQIEQERIRLSESISVLESQLKYMMGEKQSIRLELEDSKSHAVGLQDEFDKLRLEIETANVDLKQMLNDLQNQCAKAQDQCEYLQREKTKLEAAAEHLVEERNLLKKSNGELKNKNFELHEGYFRLESKVKESLERSALYFRRIDDFEDYLSLGLEDIASNERFLSSELDSIVEENIKYKEKLAMFESLSSETYWEKATEAQELHGAVVHLTKQLSAAKKDFNIMRMESDENLTALISELSVSKQNQETLIADNEKLLKQLENYKSLEVELKNSVNDLELQLYVSEKERRQNEEDLTNFKVQLQKTAHFQDEVFASSNRLEQKTAAELEDSKQSGIALEEKLLRIGSGSVVEETSFPGIDDLRNELCEIKKMNSKYQQKLKILEEEKDGCLKRSQSLEAELKHLKEEKQIQRESSSVRIHSLSKTNDKNMPSKDMKLLKNGAVKTVGQNHSGKKKPKDPNSNQSQSQIKSRQDDSGCDIDDEGPHVPEAKSISRIQMLEKELAEALEANKKYEDQLSRLVSDTQNNKENSPTSTVEGDVVKTKEGYESLNSDLEAELKDIRERYFHISLKYAEVEHQREELVMKLKAAKNSGRRWFS* 1298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25730218 25736112 - Chy4G087080.1 Chy04g01990 225889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01990 1297 MobiDBLite consensus disorder prediction 150 182 - -
Chy04g01990 1297 Coils Coil 295 315 - -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 447 466 - -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 1108 1190 - -
Chy04g01990 1297 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 139 IPR019448 -
Chy04g01990 1297 Coils Coil 700 720 - -
Chy04g01990 1297 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 1158 1172 - -
Chy04g01990 1297 Coils Coil 268 288 - -
Chy04g01990 1297 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 1022 1297 - -
Chy04g01990 1297 Coils Coil 401 421 - -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 150 171 - -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 1173 1190 - -
Chy04g01990 1297 Coils Coil 1243 1263 - -
Chy04g01990 1297 Coils Coil 478 512 - -
Chy04g01990 1297 Coils Coil 339 359 - -
Chy04g01990 1297 Coils Coil 615 642 - -
Chy04g01990 1297 Coils Coil 1073 1114 - -
Chy04g01990 1297 Coils Coil 742 815 - -
Chy04g01990 1297 Coils Coil 374 394 - -
Chy04g01990 1297 PANTHER PROTEIN MLP1-LIKE 1 1022 - -
Chy04g01990 1297 MobiDBLite consensus disorder prediction 238 263 - -
Chy04g01990 1297 PANTHER HEAVY CHAIN-LIKE PROTEIN, PUTATIVE-RELATED 1 1022 - -
Chy04g01990 1297 Coils Coil 587 607 - -
Chy04g01990 1297 PANTHER PROTEIN MLP1-LIKE 1022 1297 - -
Chy04g01990 1297 Coils Coil 1195 1222 - -
Chy04g01990 1297 Coils Coil 1271 1291 - -
Chy04g01990 1297 Coils Coil 944 981 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01990 Chy-Chr4:25730218 Chy09g00525 Chy-Chr9:5469541 1.15E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01990 - - csv:101220815 2323.89