Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01991 ATGGTCGTCGGAAACGAAACGCCCCCGATGGAGCAACACAATACCTCCACTACCACCGACAGTGAAATCCAAAACAAAGCCAGATTAGCCATTATAGAGCTCGCCAACATGATCAGCGTTCCCATGTCCCTCAACGCCATCGTCCGCCTCAACGTCGCCGACGCCATCTGGCAAAACGGTTCCAACTCTCCTCTCTCCGCCTCTGAGATCCTCGCTCGCGTGGTTCCGTCAGGCGGCGACGCCCATAATCTTGAGCGCATCTTACGTATGCTCACTAGCTACGGTGTATTCGAGGAAAATCTCAGCCCTAACTCATCTAACCACCGGTATTCCCTCACTGACGTCGGAAAAACTCTAGTCACGGACTCTGATGGCCTCTCCTACGCGCCGTACGTGCTTCAGCATCATCAGGACGCGCTTATGAGAGCGTGGCCGCGAGTGCACGAGGCGGCGATTGACTCAACGACGGAACCGTTCGTTAGAGCGAACGGTGAACCGGCGTACAGTTATTATGGGAAGAAAACGGAGATGAACGAGTTGATGCAGAGAGCAATGGCGGGCGTATCGGTGCCGTTCATGAAGGCTGTATTGGACGGCTACGATGGGTTCAAAGGAGTTGAGAAATTAGTGGATGTTGGTGGAAGCGCAGGCGATTGCTTGCGGATGATTTTACAGAAATATCCTCACATTAAGGAAGGGATTAACTTCGATCTGCCGGAGGTGGTGGCTAGGGCTCCTACTATCCCCGCTAAAGAAAAAAGTGGATTTAATGGGTGTTGTGGTAAAGAGACAGGGGTGAGTCACGTTGGAGGTGATATGTTCGAGTCCATACCGACCGGACACGCTATCTTCATGAAGTGGGTTCTATCTACTTGGACTGACGACGAATGCAAAATAATATTGGAGAATTGCTGCAAATCTCTCCCTGTAGGAGGAAAATTGATTGCCTGTGAGCCGACATTGCCGGAGAAGACGGATGAAAGCCACCGGACACGTGCTCTTTTGGCCAGCGACGTATTCATCATGACCATTTACAAGGCTAAAAGTAAGCAGCGAACTGAGGAGCAGTTCCGGCAACTCGGCCTCTCCGCTGGATTCTCCGCCCTCCGACCATTTCATATCGATTACTTCTATTGTCTGTTGGAATTCCAAAAGTGA 1158 51.3 MVVGNETPPMEQHNTSTTTDSEIQNKARLAIIELANMISVPMSLNAIVRLNVADAIWQNGSNSPLSASEILARVVPSGGDAHNLERILRMLTSYGVFEENLSPNSSNHRYSLTDVGKTLVTDSDGLSYAPYVLQHHQDALMRAWPRVHEAAIDSTTEPFVRANGEPAYSYYGKKTEMNELMQRAMAGVSVPFMKAVLDGYDGFKGVEKLVDVGGSAGDCLRMILQKYPHIKEGINFDLPEVVARAPTIPAKEKSGFNGCCGKETGVSHVGGDMFESIPTGHAIFMKWVLSTWTDDECKIILENCCKSLPVGGKLIACEPTLPEKTDESHRTRALLASDVFIMTIYKAKSKQRTEEQFRQLGLSAGFSALRPFHIDYFYCLLEFQK* 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25739079 25741608 - Chy4G087090.1 Chy04g01991 225890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01991 385 Pfam Dimerisation domain 42 92 IPR012967 GO:0046983
Chy04g01991 385 Pfam O-methyltransferase domain 150 367 IPR001077 GO:0008171
Chy04g01991 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 383 IPR029063 -
Chy04g01991 385 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 385 IPR016461 GO:0008168
Chy04g01991 385 PANTHER O-METHYLTRANSFERASE 18 384 IPR016461 GO:0008168
Chy04g01991 385 MobiDBLite consensus disorder prediction 1 22 - -
Chy04g01991 385 Gene3D - 12 124 IPR036388 -
Chy04g01991 385 SUPERFAMILY Winged helix DNA-binding domain 26 124 IPR036390 -
Chy04g01991 385 Gene3D Vaccinia Virus protein VP39 125 385 IPR029063 -
Chy04g01991 385 MobiDBLite consensus disorder prediction 8 22 - -
Chy04g01991 385 PIRSF O-mtase 9 385 IPR016461 GO:0008168
Chy04g01991 385 PANTHER OS02G0823400 PROTEIN 18 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01991 Chy-Chr4:25739079 Chy06g01912 Chy-Chr6:23020931 2.03E-68 dispersed
Chy04g01991 Chy-Chr4:25739079 Chy01g00464 Chy-Chr1:3348238 1.85E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01991 - - csv:101205175 730.709