Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02030 ATGTTTAAACCTCCAAACAGAGGAGAAGACTACACAATCCCACAAGCCATTTTCAGTATAGATATGATAATTATTTTTATGGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCGATCGACAATTTAGGCCAAATCGGAGAGTCTTTGCGGTACCCATCTCACAGTACCACCACATTCATTTCTCTAGTCAGTATATGGAACTACCTCGGCCGTGTAGTCTCCGGGTTCGTATCAGAATATTTCTGGAAAAAGTACAGAGTCCCACGCCCTCTGTTTCTCTTCGCGACACTTATTCTGTCCTGCGTCGGTCATCTTCTAATAGCATTCGGAGTTCCGAATTCATTGTATTTTTCTTCAATCGTAATCGGGTTCTGCTTCGGCGCACAATGGCCATTGATCTTTGCAATCATAGCGGAAATTTTCGGGTTGAAGTACTACGCCACTTTGTACAATATGAGTGGAGCGGCGAGTCCGATTGGGGCGTATCATGAACGTGAGAGTGGCGGGTCATTTGTACGACATGGAGGCAGAGAGACAGATGGAGGCGGCGGGGAGAGTGAGAAAGAAAGGGGAGGATTTGAGTTGCTTGGGAGTGAAATGTTAGAAAAAGGCGTTTCTTATAATCACTGGGGGGACGGTGTTGGGGGGGGACTTGTTTCGCTAATTTTGGTGGTTAGGACATGGAAGTTTTATAAGGATGATATTTACAGGAGGTTCAAGGAGGATGAAGGTGAAGACATCGAGATCAAAATCGCCGCTCCGACCGCGAAATCTCATCCTGATCCTATTGGAAGTGGCTTGGCTACGGATGCCATTTTGGAAGCGGCTGGCCCTGATTGTATTGTGCCTGGACAATCCGCACCTCTTAAATTGCTTGGTCTCAAGGTATGGCCCATTGATGTCGATCTGAAGTTTCTTGAGCCTGTTGGCCGTGAGCTTAAATTACTTGGAAAGTTTATGGATGATGCGGTGGACCTCATGAACAAGTCGTTTATTGATCGCTAG 1008 46.33 MFKPPNRGEDYTIPQAIFSIDMIIIFMATICGVGGTLTAIDNLGQIGESLRYPSHSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYRVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIVIGFCFGAQWPLIFAIIAEIFGLKYYATLYNMSGAASPIGAYHERESGGSFVRHGGRETDGGGGESEKERGGFELLGSEMLEKGVSYNHWGDGVGGGLVSLILVVRTWKFYKDDIYRRFKEDEGEDIEIKIAAPTAKSHPDPIGSGLATDAILEAAGPDCIVPGQSAPLKLLGLKVWPIDVDLKFLEPVGRELKLLGKFMDDAVDLMNKSFIDR* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25937425 25942283 - Chy4G087480.1 Chy04g02030 225929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02030 335 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 254 - -
Chy04g02030 335 Gene3D MFS general substrate transporter like domains 17 232 IPR036259 -
Chy04g02030 335 SUPERFAMILY MFS general substrate transporter 20 161 IPR036259 -
Chy04g02030 335 PANTHER MFS TRANSPORTER 1 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02030 Chy-Chr4:25937425 Chy04g02035 Chy-Chr4:25964268 2.91E-118 dispersed
Chy04g02030 Chy-Chr4:25937425 Chy04g02032 Chy-Chr4:25945943 3.02E-127 proximal
Chy10g01286 Chy-Chr10:17384287 Chy04g02030 Chy-Chr4:25937425 2.14E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02030 - - csv:101216551 362.844