Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02032 ATGGCAGCCTCAACCTCAAATCCCACCTCCGCTAACCCCTTCTGGTACCAGTTTCTCTTTGGCCGCTGGTTCTCTGTCTTCGCTTCTATTCTCATCATGTCCGTCGCCGGTGCTACCTACATGTTCGCCCTCTACTCCTCCGACATCAAATCTTCCTTAGGCTACGACCAAACCACCCTCAATTTGCTCAGTTTCTTCAAGGACTTGGGCGGCAATGTTGGCGTCATCAGTGGTCTCATCAACGAGATCGCTCCCGCCTGGGTGGTTCTTCTTATTGGTGCCGTCATGAACCTTTTTGGCTACACCATGATTTGGCTGGCCGTAACTAAAAGAATACCCAAACCCCAAATCTGGCATATGTGTCTCTATATCAGCATCGGAGCTAATTCTCAGACTTTTGCAAATACTGGGGCTCTTGTAACCTGCGTCAAAAACTTCCCGGAAAGTCGTGGTAGTGTTTTGGGGCTTTTGAAGGGGTTCGTCGGCTTAAGCGGCGCCATTTTGTCCCAACTTTACCGTGCCTTTTATGGCAATAATCCCGAATCTCTTATCCTCTTAATCGCTTGGCTTCCCGCTGCCGTCTCTGTTGTTTTGCTCCGTTTCGTTCGCATCATTAAGGATCGCCGGCAGCCCAACGAACTCAAAGTTTTTTACCATTTCCTTTACATTTCTCTCGGCCTTGCTGGGACTCTAATGGTTTTGATTATTTTGCAAAGTCTTCTCCGATTTCAACAAATACAATACGTCGGTAGTGCCATTGTTGTGATTGTTCTGCTTTTACTACCTCTGGCCATTGTTTTCAGAGAGGAATTGAGTGTTTGGAAGAGTAAAATTGCAAGCCCAGTTTCACAGTTAGAGTTAGCATCTCAACAACCACCGCCGCCACTGACTTCGACGGTGTCTCTTGCGCCATCGAGCCCTCCGTCGGAATCCTGCTTTAAAAACATGTTTAATCCTCCAAGCAGAGGAGAAGACTACACAATCCCACAAGCCATTTTCAGTATGGATTTGATAATTCTTTTTATGGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCGATCGACAATTTGGGCCAAATCGGAGAGTCTTTGGGGTACCAATCTCACAGTATCACCACATTCATATCTCTCGTCAGCATATGGAACTACCTCGGCCGTGTAGTCTCCGGATTCGTATCGGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTGTTTCTCTTCGCGACACTTATTCTGTCCTGCGTCGGTCATCTTCTAATAGCATTCGGAGTTCCGAATTCATTGTATTTTTCTTCAATCGTAATCGGGTTCTGCTTCGGCGCACAATGGCCATTGATCTATGCAATCATATCGGAGATTTTCGGGTTGAAGTACTACGCGACTTTGTCCAGTATGAGTGGAGGGGCGAGTCCGATTGGGGCATATATCTTGAACGTGAGAGTGGCGGGTCATTTGTACGACAGAGAGGCGAAAAGGCAGATGGAGGCAACGGGGCGACGGAGAAACATAGGAGAGGATTTGAGTTGCTTGGGAGTGGAATGTTACCGAAAGGCATTTCTTATAATCACGGCGGCGACGGTATTCGGGGCACTTGTTTCACTGATTCTGGTGGTTCGGACATGGAAGTTTTATAAGGGCGATATTTACCGGAAGTTCAGGGAGGTGGAAGGTGAAGACATCGAAATGAAAATGGCCGCTCCGACCAACAGTACGTTGACGGCAGCGAAAAACTGA 1743 47.45 MAASTSNPTSANPFWYQFLFGRWFSVFASILIMSVAGATYMFALYSSDIKSSLGYDQTTLNLLSFFKDLGGNVGVISGLINEIAPAWVVLLIGAVMNLFGYTMIWLAVTKRIPKPQIWHMCLYISIGANSQTFANTGALVTCVKNFPESRGSVLGLLKGFVGLSGAILSQLYRAFYGNNPESLILLIAWLPAAVSVVLLRFVRIIKDRRQPNELKVFYHFLYISLGLAGTLMVLIILQSLLRFQQIQYVGSAIVVIVLLLLPLAIVFREELSVWKSKIASPVSQLELASQQPPPPLTSTVSLAPSSPPSESCFKNMFNPPSRGEDYTIPQAIFSMDLIILFMATICGVGGTLTAIDNLGQIGESLGYQSHSITTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIVIGFCFGAQWPLIYAIISEIFGLKYYATLSSMSGGASPIGAYILNVRVAGHLYDREAKRQMEATGRRRNIGEDLSCLGVECYRKAFLIITAATVFGALVSLILVVRTWKFYKGDIYRKFREVEGEDIEMKMAAPTNSTLTAAKN* 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25945943 25947685 - Chy4G087500.1 Chy04g02032 225931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02032 580 MobiDBLite consensus disorder prediction 288 307 - -
Chy04g02032 580 CDD MFS_Mch1p_like 21 533 - -
Chy04g02032 580 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 574 - -
Chy04g02032 580 Pfam Nodulin-like 22 267 IPR010658 -
Chy04g02032 580 PANTHER MFS TRANSPORTER 9 574 - -
Chy04g02032 580 Gene3D MFS general substrate transporter like domains 331 546 IPR036259 -
Chy04g02032 580 SUPERFAMILY MFS general substrate transporter 26 548 IPR036259 -
Chy04g02032 580 Pfam Major Facilitator Superfamily 344 539 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02529 Chy-Chr2:28633104 Chy04g02032 Chy-Chr4:25945943 1.22E-110 dispersed
Chy04g02032 Chy-Chr4:25945943 Chy10g01293 Chy-Chr10:17408068 0 dispersed
Chy04g02030 Chy-Chr4:25937425 Chy04g02032 Chy-Chr4:25945943 3.02E-127 proximal
Chy04g02032 Chy-Chr4:25945943 Chy04g02035 Chy-Chr4:25964268 0 proximal
Chy04g02031 Chy-Chr4:25942415 Chy04g02032 Chy-Chr4:25945943 1.62E-100 tandem
Chy08g00876 Chy-Chr8:16172607 Chy04g02032 Chy-Chr4:25945943 1.33E-07 transposed
Chy04g02032 Chy-Chr4:25945943 Chy08g00875 Chy-Chr8:16171905 3.27E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02032 - - csv:101216551 1115.52