Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02035 ATGGCAACCTCCGGCAACCCCTTCTGGCATCAGTTGCTCTTTGGGCGGTGGTTCTCTGCCTTTGCCTCCATTCTTATGATGTCCGTCTCCGGGGCCGCCTTCATGTTTGCCCTCTACTCCTCCGACATCAAATATTCCTTTGGCTACGACCAAACCACCCTCAATTTGCTCAGCTTCTTCAAGGCCTTAGGCGGCAATGCCGGCATCATCTGCGGCCTCATCAATGAGGTAGCTCCGACTTGGATGATTCTTCTAATCGGCGCCGTCATGAACCTTTTTGGCTACATCATGATTTGGCTAGCCGTAACCAAACGGATTCCCAAGCCCCAAATATGGCATATGTGTCTCTACATTTGCATCGGAGCTAATTCTCAGACCTTTACAAATACTGGGGCCATTGTAACCTTCGTCAATAACTTCCCGGAAAGTCGTGGTTGTGTTTTGGGACTTTTGAAGGGTTACGTCGGCTTAAGCGGCGCCATTTTGTCCCAGCTTTACCATGCCTTTTATGGCAACAATTCCAAATCTTTTATTCTCTTAATTGCTTGGCTTCCCGCCGCCATCACTGTTGTTTGCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCTGCCCAACGAGGTCAAAGTTTTATACCATATCCTTTATATTTCTCTCGGCCTTGCTGGGTTGTTAATGGTTTTTATTATTTTGCAAAATCGTATCGGGTTTCATCAAATACAATACATCGGAAGTGCCATTGTTGTGATTGTTCTGCTTTTACTGCCTCTGGCCATTGTTTTCAGAGAGGAATTGATTGTTTGGAAGAGTAAAATCGGAAACCCAAATGCACAACTAGAGTTAGCATCTCAACAACCGCCGCCGCCACTTATCTCGGCAGTGCCACTGAGCCCTCCGTCGGACTCCTGCTTTAAAAACATGTTTAAACCCCCAAACAGAGGAGAGGACTACACAATCCCTCAAGCCATTTTCAGCGTCGATATGATCATTCTTTTTATCGCCTTAATCTGTGGTGTCGGTGGAACGTTGGCGGCGATGGACAATTTGGGTCAAATCAGCGAGTCTTTGGAGTACCCATCTCAGAGTACCACCACATTCATCTCTCTGGTCAGCATATGGAATTACCTCGGCCGTGTAGTCTCCGGATTCGTATCGGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTATTTCTCTTTGGGATGCTTATTTTATCCTGCGTCGGCTATCTTCTAATCGCATTCGGAGTTCCACATTCACTGTATGTTTCTTCAATCATAATTGGGTTCTGCTTTGGAGCGCAGTTGCCATTGATCTTGGCAATCATATCGGAAATTTTTGGGTTGAAGTACTATGCGACTCTAAGCAATTTGGGAGTAGCTGCAAACCCTATTGGGACGTATATTATGAATGTGAAAGTGGTGGGTCATTTGTACGACAGGGAGGCTGAACGGCAGATGGAGGCAGCAGGGGGACGAAGAAAAATAGGGGAGAATTTGAGTTGCTTGGGAGTGGAGTGTTACAGAAAGGCATTTCTTATAATCACGGGGACGACGGTGTTGGGAGGAGTTGTTTCCCTAATTTTAGTGGTTCGGACATGGAAGTTTTACAAGGGCGATATTTATAAGAAGTTCAGAGAGGAGGAAGGTGAAGACGTCGAGATCAAAACCACCGCATCGACCAAGACGCCTAAAACTGAATCTGTTTAG 1713 46.18 MATSGNPFWHQLLFGRWFSAFASILMMSVSGAAFMFALYSSDIKYSFGYDQTTLNLLSFFKALGGNAGIICGLINEVAPTWMILLIGAVMNLFGYIMIWLAVTKRIPKPQIWHMCLYICIGANSQTFTNTGAIVTFVNNFPESRGCVLGLLKGYVGLSGAILSQLYHAFYGNNSKSFILLIAWLPAAITVVCLRFVRIIKDLRLPNEVKVLYHILYISLGLAGLLMVFIILQNRIGFHQIQYIGSAIVVIVLLLLPLAIVFREELIVWKSKIGNPNAQLELASQQPPPPLISAVPLSPPSDSCFKNMFKPPNRGEDYTIPQAIFSVDMIILFIALICGVGGTLAAMDNLGQISESLEYPSQSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFGMLILSCVGYLLIAFGVPHSLYVSSIIIGFCFGAQLPLILAIISEIFGLKYYATLSNLGVAANPIGTYIMNVKVVGHLYDREAERQMEAAGGRRKIGENLSCLGVECYRKAFLIITGTTVLGGVVSLILVVRTWKFYKGDIYKKFREEEGEDVEIKTTASTKTPKTESV* 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25964268 25965980 + Chy4G087530.1 Chy04g02035 225934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02035 570 Gene3D MFS general substrate transporter like domains 321 537 IPR036259 -
Chy04g02035 570 SUPERFAMILY MFS general substrate transporter 216 536 IPR036259 -
Chy04g02035 570 MobiDBLite consensus disorder prediction 550 570 - -
Chy04g02035 570 PANTHER MFS TRANSPORTER 6 563 - -
Chy04g02035 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 563 - -
Chy04g02035 570 SUPERFAMILY MFS general substrate transporter 13 203 IPR036259 -
Chy04g02035 570 CDD MFS_Mch1p_like 15 523 - -
Chy04g02035 570 Pfam Nodulin-like 16 261 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02030 Chy-Chr4:25937425 Chy04g02035 Chy-Chr4:25964268 2.91E-118 dispersed
Chy04g02031 Chy-Chr4:25942415 Chy04g02035 Chy-Chr4:25964268 2.40E-92 dispersed
Chy04g02035 Chy-Chr4:25964268 Chy10g01289 Chy-Chr10:17397249 0 dispersed
Chy04g02032 Chy-Chr4:25945943 Chy04g02035 Chy-Chr4:25964268 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02035 - - cmo:103486508 909.827