Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02091 ATGGAGCAAGCGTTTTCAGACTTCAACATTGCTGGAGATATCTTGGATTTGTACTTCCCCCGAACTGTATTCACTGTCGAAAATGGATGGCTCAACCTCATTTCTCAGCTCATTTTCTTTTTTTCTTCTCCGGCAGGTCGACATCTCTCTTCACAGGCTGTCGATGATGGTCGTGGTATATTTATTTTGTCAATTGACTTTCAACAATTCCGGAAGATTTGTGATCAACATGAGTATTGCATAATGTTAGAGGAAAATCCTAAAGTTGCTCTCAAATGTATGAGTGCTGCAATTCATCAGGCAATGAGGACCAAGTGGGTGCATAATTTAGAAGATGTCACAAAAATTCTAGTCCGATTGCACAACTATTCAGAATCTATGCTTGCTTTGAAGAATTTGAAGGCGGCATATATTGACAAGCTCGTATCAGTGCGTGGCACTGTTGTTAAGGTTAGCACTGTGAAGCCCTTGGTGGTGCAAATGAGCTTTGATTGTGCAAAGTGCAAAAGCCATATCACACGAAGCTTTCCTGATGGTAAGTTTTCACCTCCATCGTTTTGTGAGTTGGATGGGTGTAAAAGCAAAACATTCAATCCCATTCGATCGACAGCTGAAGCAATCGACTTTCAAAAGATACGATTACAAGAACTCACTAAACCTGATGATCACGAAGAAGGCAGGGTGCCTCGAACTGTAGAATGTGAACTGACTGAAGATCTAGTTGACGCATGCATCCCTGGAGATGTTGTCACTGTTACTGGAATTATAAGAGTAATTAATAATTACATGGATATTGGAGGAGGGAAATCGAAGAGCAAAAACCAAGGATTTTACTATTTGTATCTGGAGGCTGTTTCAATAAAAAATTCCAAGTCACAGTCTACACCTGAGGAGTTGCAAGATTCTAACTCTAATGCAAGAGCAACTGAGTTGCTTGATTTATTCTCATTCTCCCCAAGAGATTTAGAATTTATTGTGAAATTCTCTGGGGAATATGGTTCGGATGTCTTTCGTCAAATACTGCAATCCATTTGTCCTTCCATCTATGGACATGAACTTGTTAAAGCGGGAATAACACTAGCACTGTTTGGTGGTGTGCGAAAGCATTCAAAAGACCAGAATAAAGTTCCTGTTAGAGGGGATATTCATGTCATAGTAGTTGGTGATCCTGGACTTGGCAAAAGTCAACTCCTGCAAGCTGCTGCAGCTATTTCTCCACGTGGTATATATGTTTGTGGTAATGCAACAACCAAGGCCGGCCTAACTGTAGCTGTTGTGAGGGATTCCATGAAAAATGACTATGCTTTTGAGGCTGGGGCTATGGTACTTGCAGATGGTGGATTATGCTGTATAGATGAGTTCGATAAAATGTCTACAGAACATCAGGCCCTACTGGAAGCCATGGAACAACAATGTGTATCAATTGCAAAAGCTGGACTGGTAGCAAGTCTGTCAGCTCGCACTTCTATTTTAGCTGCAGCTAACCCTGTTGGTGGTCATTACAACCGGGCAAAAACTGTGAATGAAAACTTGAAGATGAGTGCCGCTCTTCTCTCGAGATTTGATTTGGTTTTTATATTGCTGGATAAACCTGATGAATTTCTGGATAAGAGAGTCTCGGAGCACATCATGTCGCTTCATGCTGGATGTGGGGAACGCGCCTCTGCAGCAAAAAGACTACGTAAAGATATATCTCCTTTGGCTTTAAAGAATGTAGCAATGGAGAATGATGGAAAAGTAGATGCTGGTTCAAGACGCGAGTCTTTAGTTTCAAGACTGAGATTGGACAAAACAAAAGATGGAGATTTTGTACCATTACCTGGCCAACTTCTTCGCAAATATATAGCCTATTCAAGAACTTTTGTGTTCCCCAGGATGTCAAAGCCCGCAGCAGACATCTTGCAGAGATTTTATTTACGACTGCGTGACCAGAATACGTCAGTGGATGGTACACCAATTACAGCAAGGCAACTAGAAAGTTTGGTAAGGCTGGCAGAAGCCCGAGCACGGGTAGACCTCAGGGAAGAAATTACAGTAGAAGATGCAATGGATGTGGTTGAAATAATGAAGGAATCCCTATACGATAAGTATGTAGATGAACATGGGGTCCTGGATTTTGGTCGAAGTGGGGGAATGAGTCAACAGAAAGAAGCCAAACGATTTCTGAGTGCACTCAACAAGCAATCTGAGTTGCAGCAGAAAGACTGTTTTTCTATCTCGGAAATATATAGCTTGGCAGATAAGATTGGCCTACGAGTACCTGACATCGATACCTTCATAGAAAATCTCAATTGTGTTGGATATCTGCTTAAGAAGGGGCCAAAGACATACCAGGCTAGAGATGGCTCTTCCACGATGCCAAACATGTATTATTCGTTGAAGCCGAAATAA 2391 41.74 MEQAFSDFNIAGDILDLYFPRTVFTVENGWLNLISQLIFFFSSPAGRHLSSQAVDDGRGIFILSIDFQQFRKICDQHEYCIMLEENPKVALKCMSAAIHQAMRTKWVHNLEDVTKILVRLHNYSESMLALKNLKAAYIDKLVSVRGTVVKVSTVKPLVVQMSFDCAKCKSHITRSFPDGKFSPPSFCELDGCKSKTFNPIRSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVINNYMDIGGGKSKSKNQGFYYLYLEAVSIKNSKSQSTPEELQDSNSNARATELLDLFSFSPRDLEFIVKFSGEYGSDVFRQILQSICPSIYGHELVKAGITLALFGGVRKHSKDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAISPRGIYVCGNATTKAGLTVAVVRDSMKNDYAFEAGAMVLADGGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSARTSILAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDEFLDKRVSEHIMSLHAGCGERASAAKRLRKDISPLALKNVAMENDGKVDAGSRRESLVSRLRLDKTKDGDFVPLPGQLLRKYIAYSRTFVFPRMSKPAADILQRFYLRLRDQNTSVDGTPITARQLESLVRLAEARARVDLREEITVEDAMDVVEIMKESLYDKYVDEHGVLDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADKIGLRVPDIDTFIENLNCVGYLLKKGPKTYQARDGSSTMPNMYYSLKPK* 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26301887 26308639 + Chy4G088090.1 Chy04g02091 225990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02091 796 Gene3D - 130 260 IPR012340 -
Chy04g02091 796 Gene3D - 314 702 IPR027417 -
Chy04g02091 796 Gene3D - 157 207 - -
Chy04g02091 796 ProSiteProfiles MCM family domain profile. 336 543 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PANTHER DNA HELICASE MCM8 7 782 - -
Chy04g02091 796 SUPERFAMILY Nucleic acid-binding proteins 59 260 IPR012340 -
Chy04g02091 796 Pfam MCM AAA-lid domain 610 693 IPR041562 -
Chy04g02091 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 439 453 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 517 525 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 379 394 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 490 502 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PRINTS Mini-chromosome maintenance (MCM) protein family signature 466 479 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 SMART mcm 126 694 IPR031327 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 7 782 IPR031327 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 CDD MCM8 340 692 - -
Chy04g02091 796 Pfam MCM P-loop domain 334 547 IPR001208 GO:0003677|GO:0005524|GO:0032508
Chy04g02091 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 699 IPR027417 -
Chy04g02091 796 Pfam MCM OB domain 130 259 IPR033762 -
Chy04g02091 796 SMART AAA_5 380 532 IPR003593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02091 Chy-Chr4:26301887 Chy05g01255 Chy-Chr5:16905791 2.71E-89 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02091 K10737 - csv:101211972 1496.1