Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02095 ATGGACGCTAAGCTTTTGCTTCTGCTTCTTCTCTTTCTTTTCGACGTCTCCTTTGCTCAGATGCCAGGCATTTACTCCAATCTCTGTTATTCTCGTTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGATATTGGTCTTGAGTGGGATCCAGATACCCAAGTTCGTTTTGGAGAAGCAGTTAACATTTCTGTTGCAAATGAAACGAGGAAGCAATATATGACGTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGTTACTCACTTAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTATACGGTAATTTTGACAACAACAATGTGTATCCAAAATTTGACATTTCCCTCGGGGCAACTCACTGGTCAACAATTGTCATATCTGACGCCAACACTATCGAGGTTCGAGAACTCATATTTCTGGCTTCAACTCCTACTGTAAGCGTATGTTTGTCAAATGCTACTACTGGGCAGCCATTCATATCCACGCTCGAGCTTCGGCAGTTTAACGGTTCTGCCTATTACACTCAATTTGAAGATCAGTTTTACCTGAGTGTCTCAGCAAGGATTAATTTTGGAGCAGATTCGGAAGCTCCAGTAAGGTATCCTGATGATCCTTTTGACCGGATGTGGGAGTCGGACTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACAGAAAAAGTTTCCACTAAATTACCAATAGATGTGGATAGAGATGAAAGACCACCTCAAAAAGTAATGCAGACAGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGGTTAAACTTGGATGGTTTTCCTGGCTTTGGATGGGCAGTCACCTACTTTGCAGAAATTGAAGACTTGGGTCCAACTGATACAAGAAAATTCAGGCTTGTACTTCCTGGAATGCCTGAAATCAGCAAAGCTGTAGTCAATATTGAGGAAAATGCTCAAGGAAAATATCGACTTTATGAGCCTGGTTTCACCAACATAACCTTACCGTTTGTTTTATCTTTTCGGTTTGGTAAAACACAAGATTCTTCATTAGGACCTCTGTTAAACGCTATGGAGATTAACAGGTATCTAGAAAAAAGTGATGGTTCTCTAGATGGAGCAGTTGTTGCTAGTGTAATTTCAAAATTTCCATCATCAGATTGGGATGAAGGTGGCGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACAGCCAAGAATAATTAAAATTTCATTGTCCAAACAGAATTTGTCGGGGAACATACCTACAGACATTGCAAAGTTGAGCGGTTTAGTTGAATTATGGCTTGATGGAAATTCATTTGTTGGTCCTATACCCGATTTTACTGGATGCATGGACTTGAAAATCCTCCATCTTGAGAACAACCAGTTGACTGGAGAGTTGCCTTCCTCTTTAGCAAGTCTACCAAATTTACGGGAGCTGTATGTGCAGAATAACATGCTATCTGGAACAGTGCCCTCTGGTCTTCTCAGTAAAAACCTAGTCGTTGACTACTCTGGAAACATTAATCTTCACGAAGCGGGAAAAAAGAACCACGTTTATATCATTGTGGGTTCAGTAATTGGTGCTGTTGTTCTGCTGTTAGCTACTGTGGTATCTTGCTACTTCTTACATAAAGGAAGAAGAAGATATCATGAACAAGGAGATCTACCTGAAGAATCCTTGGCTGTACAAAGATTTGTCTCGTCAAAGGGTGATGCCTCCAAGGAAACCGCACATTGCTTCAGTGTAAATGAAATCGTCCAAGCAACGAAAGATTTTGAAAGAAAAATTGGGTCTGGAGGTTTCGGTGTTGTGTACTACGGGAAGTTAAATGATGGAAAAGAAATTGCAGTTAAAGTTTTGACTAGTAATTCCTTCCAGGGAAGGCGAGAATTTGCAAATGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATCTTGTACAATTTCTGGGATATTGCCAAGAACAAGACAGAAGTATGCTTATCTATGAGTTCATGCATAATGGAACTCTCAAAGAACATCTTTATGGTAAGCCCACATGTCATTTTTGCAGTAAACAATGCAGGTTCCAAAACCAACTGACTTCTCGTTGGTGTACAGGTCCACTAACACGGGAAAAAACTATCAGTTGGATAAAGCGCCTCGAGATTGCTGAAGATGCTGCAAGAGGGGTTGAGTACCTTCATACAGGCTGTATTCCAGCAATTATTCACAGGGACTTGAAAAGCAGTAATATTCTTCTTGACAGGCACATGAAAGCCAAGGTTTCAGATTTTGGTCTTTCGAAGCTTGCAGTGGATGGGGTCTCCCATGTGTCCAGCATCGTTCGGGGGACTGTTGGATATTTGGATCCAGAGTATTACATCTCCCAGCAGTTGACAGACAAGAGTGATGTATATAGCTTTGGCGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCTATATCTAATGTAAACTTTGGTGCTAATTGCCGCAACATTGTCCAATGGGCGAAATTACACATTGAGAGCGGTGACATTCAAGGGATCATCGATCCATCGCTCCGCAATGAATATGACATTCAATCCATGTGGAAAATCGCAGAGAAAGCACTAATGTGTGTACAGGCAAATGGGCACCTGAGGCCATCCATATCTGAAGTGCTGAAGGAGATACAGGATTCAATTCTAATTGAAAGGGAATCAACTGCAACTAAAGAAGGTAACTCTGATGACATGTCTAGAAACTCAGTCCATTCTTTGAATATGGGATCTCTCGATTTGTGTGGAAACGAAAACTATGTGTCGTTTGACGAATCCATTGCTCGGCCTACTGCAAGGGTTTTCGTGAAGATGGCTGATGCTCCGGCGAGTCCCGGCGGAGGAAGCCATGAGAGCGGTGAGCAGAGTCCGAGGTCTAATGTTCGCGAACAGGATAGGTTTCTTCCTATTGCGAATATTAGTAGGATCATGAAGAAGGCTCTTCCTGCTAATGGGAAGATTGCTAAGGATGCTAAAGAAACCGTACAAGAATGTGTATCGGAGTTTATCAGTTTTATTACTAGCGAGGCAAGTGATAAATGTCAAAGAGAGAAACGGAAGACGATTAATGGTGATGATTTACTTTGGGCCATGGCCACTCTTGGATTTGAGGATTATATTGATCCACTTAAAACCTACTTGACGAAATACAGAGAGACGGAGGGTGACACTAAGGGGTCTGCTAAAGGTGGTGATGGGTCAGCTAAGAAAGAAGCTCATCCAACCCCTATTCCTCAGATGGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTCCCTATGCAAGGCACTGACTAA 3396 41.93 MDAKLLLLLLLFLFDVSFAQMPGIYSNLCYSRFVSLDCGGQESFTDDIGLEWDPDTQVRFGEAVNISVANETRKQYMTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWSTIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSAYYTQFEDQFYLSVSARINFGADSEAPVRYPDDPFDRMWESDSVRKANYLVDVAAGTEKVSTKLPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPEISKAVVNIEENAQGKYRLYEPGFTNITLPFVLSFRFGKTQDSSLGPLLNAMEINRYLEKSDGSLDGAVVASVISKFPSSDWDEGGDPCMPVPWSWLQCNSDPQPRIIKISLSKQNLSGNIPTDIAKLSGLVELWLDGNSFVGPIPDFTGCMDLKILHLENNQLTGELPSSLASLPNLRELYVQNNMLSGTVPSGLLSKNLVVDYSGNINLHEAGKKNHVYIIVGSVIGAVVLLLATVVSCYFLHKGRRRYHEQGDLPEESLAVQRFVSSKGDASKETAHCFSVNEIVQATKDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGRREFANEVTLLSRIHHRNLVQFLGYCQEQDRSMLIYEFMHNGTLKEHLYGKPTCHFCSKQCRFQNQLTSRWCTGPLTREKTISWIKRLEIAEDAARGVEYLHTGCIPAIIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGANCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQANGHLRPSISEVLKEIQDSILIERESTATKEGNSDDMSRNSVHSLNMGSLDLCGNENYVSFDESIARPTARVFVKMADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTKGSAKGGDGSAKKEAHPTPIPQMAHQGSFSQGVNYASSQSQAQHLMVPMQGTD* 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26324861 26338645 - Chy4G088130.1 Chy04g02095 225994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02095 1131 Pfam Malectin-like domain 36 365 IPR024788 -
Chy04g02095 1131 SUPERFAMILY Histone-fold 985 1092 IPR009072 GO:0046982
Chy04g02095 1131 MobiDBLite consensus disorder prediction 1101 1131 - -
Chy04g02095 1131 ProSitePatterns NF-YB/HAP3 subunit signature. 1019 1035 IPR003956 GO:0005634|GO:0006355|GO:0043565
Chy04g02095 1131 MobiDBLite consensus disorder prediction 1075 1090 - -
Chy04g02095 1131 Gene3D Ribonuclease Inhibitor 382 529 IPR032675 -
Chy04g02095 1131 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Chy04g02095 1131 CDD STKc_IRAK 609 900 - -
Chy04g02095 1131 PANTHER OS07G0107800 PROTEIN-RELATED 715 940 - -
Chy04g02095 1131 Gene3D Phosphorylase Kinase; domain 1 577 678 - -
Chy04g02095 1131 MobiDBLite consensus disorder prediction 961 985 - -
Chy04g02095 1131 PANTHER TYROSINE KINASE DOMAIN PROTEIN 715 940 - -
Chy04g02095 1131 ProSiteProfiles Protein kinase domain profile. 603 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02095 1131 Gene3D Histone, subunit A 976 1109 IPR009072 GO:0046982
Chy04g02095 1131 PANTHER TYROSINE KINASE DOMAIN PROTEIN 31 691 - -
Chy04g02095 1131 SMART serkin_6 603 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02095 1131 PRINTS CCAAT-binding transcription factor subunit A signature 1016 1034 - -
Chy04g02095 1131 PRINTS CCAAT-binding transcription factor subunit A signature 1035 1053 - -
Chy04g02095 1131 PRINTS CCAAT-binding transcription factor subunit A signature 1054 1072 - -
Chy04g02095 1131 Gene3D Transferase(Phosphotransferase) domain 1 679 926 - -
Chy04g02095 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Chy04g02095 1131 SUPERFAMILY L domain-like 402 509 - -
Chy04g02095 1131 Pfam Protein tyrosine and serine/threonine kinase 605 844 IPR001245 GO:0004672|GO:0006468
Chy04g02095 1131 MobiDBLite consensus disorder prediction 1075 1131 - -
Chy04g02095 1131 SUPERFAMILY Protein kinase-like (PK-like) 590 897 IPR011009 -
Chy04g02095 1131 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 988 1052 IPR003958 -
Chy04g02095 1131 PANTHER OS07G0107800 PROTEIN-RELATED 31 691 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00617 Chy-Chr4:7005893 Chy04g02095 Chy-Chr4:26324861 4.52E-08 dispersed
Chy04g00618 Chy-Chr4:7015351 Chy04g02095 Chy-Chr4:26324861 3.75E-15 dispersed
Chy04g02095 Chy-Chr4:26324861 Chy07g00522 Chy-Chr7:4244476 1.51E-81 dispersed
Chy08g01015 Chy-Chr8:17367715 Chy04g02095 Chy-Chr4:26324861 1.28E-27 dispersed
Chy01g01370 Chy-Chr1:18493118 Chy04g02095 Chy-Chr4:26324861 2.57E-121 transposed
Chy01g01662 Chy-Chr1:22570705 Chy04g02095 Chy-Chr4:26324861 9.45E-42 transposed
Chy02g02392 Chy-Chr2:27702604 Chy04g02095 Chy-Chr4:26324861 2.85E-16 transposed
Chy03g00262 Chy-Chr3:2657257 Chy04g02095 Chy-Chr4:26324861 4.68E-65 transposed
Chy06g01888 Chy-Chr6:22731154 Chy04g02095 Chy-Chr4:26324861 3.41E-41 transposed
Chy06g01902 Chy-Chr6:22863372 Chy04g02095 Chy-Chr4:26324861 3.98E-49 transposed
Chy07g01303 Chy-Chr7:17697258 Chy04g02095 Chy-Chr4:26324861 6.00E-52 transposed
Chy10g00814 Chy-Chr10:14115493 Chy04g02095 Chy-Chr4:26324861 0 transposed
Chy11g01856 Chy-Chr11:24810230 Chy04g02095 Chy-Chr4:26324861 3.06E-127 transposed
Chy10g00622 Chy-Chr10:12810053 Chy04g02095 Chy-Chr4:26324861 2.05E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17941 PF12819 Malectin_like 5.60E-76 CL0202 Chy TF
71225 PF12819 Malectin_like 5.60E-76 CL0202 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02095 - - csv:101212456 1814.28