Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g02100 | ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAGCTCAAGTCCAAGAAATTGAACACGTTGGAATCTCAGAACACTCGAGTTGATCTGATCAACGGGAAACTAAAGACAAGTTCCTCCTTCAGTGAAACCTCCAAAGGTGGAGGATCTGAACCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTAGGAGAAGGAGGTTTTGGTAGAGTTTACAAAGGAAAGTTGGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTTGCAAGGGAACAGAGAATTTCTTGTTGAAGTGTTGATGTTAAGCCTACTTCATCACCCAAATTTAGTTAACCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGACATTTCACCTGGTACAAAAGTTCTGGATTGGAATACAAGAATGAGAATAGCTGCTGGGGCAGCTCGAGGATTGGAATACTTGCACGACAAAGCTAGCCCGCCAGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGACAGAGGTTATCATCCCAAGCTGTCTGATTTTGGATTAGCTAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTATGGATATTGTGCTCCCGAATATGCAATGACTGGTCAGTTAACTCTCAAGTCAGATGTTTATAGCTTTGGCGTTGTTCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCCAAAGCTGCAGGGGAGCAAAATCTGGTTTCATGGGCAAGACCATTGTTTAAAGACCGTCTGAGATTTGCGCAAATGGCCGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTATATCAAGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCTGTGATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCTCAAAGATACGACCCTGGTATTATTTTACCCAACGACTCCCCTGGATCTGCCTATACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAACTTAATGGAGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA | 1188 | 41.92 | MIWIPCSGNSNRKLKSKKLNTLESQNTRVDLINGKLKTSSSFSETSKGGGSEPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMRIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSKAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYDPGIILPNDSPGSAYTPPRTNRDSDRKLNGGRRYDRNPTKRL* | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26381217 | 26383884 | + | Chy4G088180.1 | Chy04g02100 | 225999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g02100 | 395 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672|GO:0006468 | |
Chy04g02100 | 395 | SMART | serkin_6 | 71 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02100 | 395 | PANTHER | OS07G0668900 PROTEIN | 1 | 383 | - | - | |
Chy04g02100 | 395 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 147 | - | - | |
Chy04g02100 | 395 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 360 | IPR011009 | - | |
Chy04g02100 | 395 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524 | |
Chy04g02100 | 395 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 344 | IPR001245 | GO:0004672|GO:0006468 | |
Chy04g02100 | 395 | MobiDBLite | consensus disorder prediction | 359 | 395 | - | - | |
Chy04g02100 | 395 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 355 | - | - | |
Chy04g02100 | 395 | CDD | STKc_IRAK | 77 | 345 | - | - | |
Chy04g02100 | 395 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED | 1 | 383 | - | - | |
Chy04g02100 | 395 | MobiDBLite | consensus disorder prediction | 373 | 395 | - | - | |
Chy04g02100 | 395 | ProSiteProfiles | Protein kinase domain profile. | 71 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02100 | Chy-Chr4:26381217 | Chy12g00891 | Chy-Chr12:14274954 | 0 | dispersed | |
Chy12g00528 | Chy-Chr12:7317261 | Chy04g02100 | Chy-Chr4:26381217 | 6.74E-88 | dispersed | |
Chy01g00993 | Chy-Chr1:10286807 | Chy04g02100 | Chy-Chr4:26381217 | 3.11E-33 | transposed | |
Chy02g01712 | Chy-Chr2:17498110 | Chy04g02100 | Chy-Chr4:26381217 | 9.97E-146 | transposed | |
Chy04g01361 | Chy-Chr4:20276931 | Chy04g02100 | Chy-Chr4:26381217 | 2.89E-90 | transposed | |
Chy06g00666 | Chy-Chr6:4553339 | Chy04g02100 | Chy-Chr4:26381217 | 5.52E-27 | transposed | |
Chy06g01745 | Chy-Chr6:20286736 | Chy04g02100 | Chy-Chr4:26381217 | 1.13E-69 | transposed | |
Chy06g01805 | Chy-Chr6:21715067 | Chy04g02100 | Chy-Chr4:26381217 | 3.49E-172 | transposed | |
Chy09g00497 | Chy-Chr9:4815910 | Chy04g02100 | Chy-Chr4:26381217 | 2.08E-65 | transposed | |
Chy10g00876 | Chy-Chr10:14569619 | Chy04g02100 | Chy-Chr4:26381217 | 1.66E-45 | transposed | |
Chy10g00613 | Chy-Chr10:12711144 | Chy04g02100 | Chy-Chr4:26381217 | 0 | wgd | |
Chy11g01290 | Chy-Chr11:19071984 | Chy04g02100 | Chy-Chr4:26381217 | 5.84E-166 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71226 | PF07714 | PK_Tyr_Ser-Thr | 8.40E-46 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g02100 | - | - | csv:101211491 | 773.852 |