Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02100 ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAGCTCAAGTCCAAGAAATTGAACACGTTGGAATCTCAGAACACTCGAGTTGATCTGATCAACGGGAAACTAAAGACAAGTTCCTCCTTCAGTGAAACCTCCAAAGGTGGAGGATCTGAACCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTAGGAGAAGGAGGTTTTGGTAGAGTTTACAAAGGAAAGTTGGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTTGCAAGGGAACAGAGAATTTCTTGTTGAAGTGTTGATGTTAAGCCTACTTCATCACCCAAATTTAGTTAACCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGACATTTCACCTGGTACAAAAGTTCTGGATTGGAATACAAGAATGAGAATAGCTGCTGGGGCAGCTCGAGGATTGGAATACTTGCACGACAAAGCTAGCCCGCCAGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGACAGAGGTTATCATCCCAAGCTGTCTGATTTTGGATTAGCTAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTATGGATATTGTGCTCCCGAATATGCAATGACTGGTCAGTTAACTCTCAAGTCAGATGTTTATAGCTTTGGCGTTGTTCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCCAAAGCTGCAGGGGAGCAAAATCTGGTTTCATGGGCAAGACCATTGTTTAAAGACCGTCTGAGATTTGCGCAAATGGCCGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTATATCAAGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCTGTGATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCTCAAAGATACGACCCTGGTATTATTTTACCCAACGACTCCCCTGGATCTGCCTATACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAACTTAATGGAGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA 1188 41.92 MIWIPCSGNSNRKLKSKKLNTLESQNTRVDLINGKLKTSSSFSETSKGGGSEPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMRIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSKAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYDPGIILPNDSPGSAYTPPRTNRDSDRKLNGGRRYDRNPTKRL* 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26381217 26383884 + Chy4G088180.1 Chy04g02100 225999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02100 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Chy04g02100 395 SMART serkin_6 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02100 395 PANTHER OS07G0668900 PROTEIN 1 383 - -
Chy04g02100 395 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Chy04g02100 395 SUPERFAMILY Protein kinase-like (PK-like) 57 360 IPR011009 -
Chy04g02100 395 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Chy04g02100 395 Pfam Protein tyrosine and serine/threonine kinase 76 344 IPR001245 GO:0004672|GO:0006468
Chy04g02100 395 MobiDBLite consensus disorder prediction 359 395 - -
Chy04g02100 395 Gene3D Transferase(Phosphotransferase) domain 1 148 355 - -
Chy04g02100 395 CDD STKc_IRAK 77 345 - -
Chy04g02100 395 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 383 - -
Chy04g02100 395 MobiDBLite consensus disorder prediction 373 395 - -
Chy04g02100 395 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02100 Chy-Chr4:26381217 Chy12g00891 Chy-Chr12:14274954 0 dispersed
Chy12g00528 Chy-Chr12:7317261 Chy04g02100 Chy-Chr4:26381217 6.74E-88 dispersed
Chy01g00993 Chy-Chr1:10286807 Chy04g02100 Chy-Chr4:26381217 3.11E-33 transposed
Chy02g01712 Chy-Chr2:17498110 Chy04g02100 Chy-Chr4:26381217 9.97E-146 transposed
Chy04g01361 Chy-Chr4:20276931 Chy04g02100 Chy-Chr4:26381217 2.89E-90 transposed
Chy06g00666 Chy-Chr6:4553339 Chy04g02100 Chy-Chr4:26381217 5.52E-27 transposed
Chy06g01745 Chy-Chr6:20286736 Chy04g02100 Chy-Chr4:26381217 1.13E-69 transposed
Chy06g01805 Chy-Chr6:21715067 Chy04g02100 Chy-Chr4:26381217 3.49E-172 transposed
Chy09g00497 Chy-Chr9:4815910 Chy04g02100 Chy-Chr4:26381217 2.08E-65 transposed
Chy10g00876 Chy-Chr10:14569619 Chy04g02100 Chy-Chr4:26381217 1.66E-45 transposed
Chy10g00613 Chy-Chr10:12711144 Chy04g02100 Chy-Chr4:26381217 0 wgd
Chy11g01290 Chy-Chr11:19071984 Chy04g02100 Chy-Chr4:26381217 5.84E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71226 PF07714 PK_Tyr_Ser-Thr 8.40E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02100 - - csv:101211491 773.852