Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02103 ATGGCTGCTCTTGTGGAAGAGATTTTACCTCCGTCGTTGGATGCTACTGCCGAACAACCTCCTCTGTTCGACGGAACTACTAGGTTGTATACTGCTTACATTTGCCCCTATGCTCAACGTGTGTGGATCACCCGGAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTCAGTCTTTTTAACAGGCCTGACTGGTATAAGGAGAAAGTGTACTCTCCAAACAAGGTGCCATCTCTAGAACACAACGGGAAAGTTATTGGAGAAAGTCTTGATCTGATGAAATATGTTGATAGCCACTTTGAAGGACCCTCTCTTCTCCCAAATGATCCTGCTAAAAGGGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACATTTAACGGTGCCATGATCTCTTCGTTTAAAGGTGACACTACAAAGGAAGCAGGTAAAACTCTTTAG 447 43.4 MAALVEEILPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLSLFNRPDWYKEKVYSPNKVPSLEHNGKVIGESLDLMKYVDSHFEGPSLLPNDPAKREYAEELLSYSDTFNGAMISSFKGDTTKEAGKTL* 149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26402922 26404899 - Chy4G088210.1 Chy04g02103 226002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02103 148 Gene3D - 104 148 - -
Chy04g02103 148 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 3 147 - -
Chy04g02103 148 Gene3D Glutaredoxin 1 103 - -
Chy04g02103 148 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Chy04g02103 148 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Chy04g02103 148 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 147 IPR044629 GO:0004364
Chy04g02103 148 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02103 Chy-Chr4:26402922 Chy12g01546 Chy-Chr12:19136634 1.08E-08 dispersed
Chy04g02103 Chy-Chr4:26402922 Chy04g02105 Chy-Chr4:26412294 4.71E-78 proximal
Chy10g00609 Chy-Chr10:12668897 Chy04g02103 Chy-Chr4:26402922 3.60E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02103 K00799 - csv:101211241 296.975