Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02105 ATGGCTACTGCAACTGTCGTACCGGAAGTTCGTCCCCCGTCATTGGAAGCCGACGCCGAACAACCTCCGCTCTTCGACGGAACCACCAGGTTATATATGGCTTACTATTGCCCATTTGCACAGCGTGCTTGGATCACAAGAAATTACAAGGGATTACAAGATAAAATAAAATTAGTGCCTCTAAACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTGAACCCTACAAACAAGGTGCCAGCGTTGGAACACAATGGGAAAGTAATTGGTGAAAGCCTTGATTTGATCAAATACATAGATAGCAACTTTGAAGGCCCTTCTCTTTTCCCAGACGATGCTGCTAAAAGACAATTCGATGAAGAGTTGATAGCTTATACTGATACATTCACTGGGGCAGTGTACCCTTCATTTAAGGGTGACCCAGCTAAGGAAGCAGGTCCTCAGTTTGATTACTTGGAGAATGCTCTGCAAAAATTTGATGATGGCCCATTCCTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTGATCGAAAGATTTCATGTATTTTTAAACGAGGTTTTCAAGTATGATATCACAGAAGGAAGACCTCATCTAGCTACATGGATTGAGGAATTCGAGAAGATTGATGCTTACAAGCAAACAAAATATGACCCTACAGCGATTGTTGAACTTTACAAGAAGCGCTTTATGGCTTAA 711 42.05 MATATVVPEVRPPSLEADAEQPPLFDGTTRLYMAYYCPFAQRAWITRNYKGLQDKIKLVPLNLQNRPAWYKEKVNPTNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDAAKRQFDEELIAYTDTFTGAVYPSFKGDPAKEAGPQFDYLENALQKFDDGPFLLGQFSGVDIAYITLIERFHVFLNEVFKYDITEGRPHLATWIEEFEKIDAYKQTKYDPTAIVELYKKRFMA* 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26412294 26415946 - Chy4G088230.1 Chy04g02105 226004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02105 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Chy04g02105 236 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 3 235 - -
Chy04g02105 236 CDD GST_C_Lambda 113 231 - -
Chy04g02105 236 Gene3D - 106 236 - -
Chy04g02105 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 235 IPR044629 GO:0004364
Chy04g02105 236 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Chy04g02105 236 Pfam Glutathione S-transferase, C-terminal domain 149 208 - -
Chy04g02105 236 Gene3D Glutaredoxin 2 105 - -
Chy04g02105 236 SFLD Glutathione Transferase (cytosolic) 30 210 IPR040079 -
Chy04g02105 236 SFLD Main (cytGST) 30 210 - -
Chy04g02105 236 MobiDBLite consensus disorder prediction 1 21 - -
Chy04g02105 236 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Chy04g02105 236 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02105 Chy-Chr4:26412294 Chy10g00609 Chy-Chr10:12668897 2.84E-110 dispersed
Chy04g02103 Chy-Chr4:26402922 Chy04g02105 Chy-Chr4:26412294 4.71E-78 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02105 K00799 - csv:101210004 476.092