Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02153 ATGACCCCAGATAGAGAACTTAGAAAGTCGGGTCGGTACATAGATAATCGTCCTTTTGGGATTCAAGCACAAGAGGGCACCCATGGCAGGCCTAGATTTCAGAATACCATTTTTAGTCATAACTTTCAAGAATTTGATTGCCTTCTCCCTAATCCATCACCGAGCAACATAGCCTCAAGTTCCAGCATTAGAACCTCATCTTCTAATGATGCAAGTCATGAGGAAGATTATCTGGAAGATTGCGATTTTTCTGATGCTGTTTTGACATTCATAAATCAAATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCTGCTGAGAAATCATTCTATGAGGTCCTCGGAAAAAAGTATCCTCCTTCCCCTGAGGTAAATAGATCTCTGGCCAATCAATACACTGATAGCTTGAACGAAGAACTTTGTGGAGATAGTAGTAATTACCTGAGTAATTACAGTAATACTTCTTATCGTGGCGATGATGATCCTCAAACTCTGAGTGCAGATGTATTTCAAATCAGAAGCGCTTTAGGTGATACCATATCTCCATCATCTAATAGTTCATCGAATAGTGTAATTAGTGGGGGTGATGGGTGGGTGGACTTCTCTAATAATACAATTCAAGTTCCTGAGCCTAATAACAGAAGCCAATCGATTTGGCAGTTTCAAAAAGGATTTGAAGAGGCAAGCAAATTTTTACCTGGTGGAAACAAATTGTGTCTTGATTTTGAGGTAAATGGGTCAGCAACTCAGGGTCCCGATGAGGGTACGAGCCAAATATATTTGAAGGCAGCTAGAAAGGATCAGAGGAATGTTTTCTCACCTGAATCACGTGGTAGAAAGAATCCTCATGATGAGAATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCCGTATTTGCAGAGTCGCCTCTGCGATCTGAGATGTTTGATATTGTGTTGCTTTGTAGTGCTGGAGAGGGACATGAACGGTTAGTTTCATTTCGACAGGAATTACATGATGCTAAAATCAAAAGCATGCTGCAGAGTGGGCAGCTAAAAGTGTCTAATGGTGGTAGGGGTCGTCGGAAGAAGCAGAGTGCGAAAAAAGAGGTTGTGGATTTGAGAACCCTTCTAATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCCAGTGAGCTTCTAAAGCAGGTCAGACAACATGCTTCTCCTTTTGGTGATGGAAGTCAGAGGTTAGCTAGTTGTTTTGCTGATGGTCTGGAGGCACGGTTGGCAGGAACTGGTAGCCAGATTTACAAAGGTCTAATTAATAAAAGGACATCTGCTGCTGATGTACTGAAAGCTTACCACTTGTACCTTGCTGCATGCCCATTTAGAAAGATCTCTAATTTTACTTCAAACAGGACTATAATGATTGCTGCAGAGAGCGCAACTAGGCTTCATGTCATAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTAATCCAGAGATTGTCATGGAGAAAAGGTGGACCTCCGAAGCTTCGAATTACTGGAATAGAATTTCCACAGCCTGGGTTTCGTCCTGCAGAGAGAGTTGAGGAGACAGGTCGTCGTTTGGCGGCTTATGCAGAGAGTTTCAATGTGCCATTTGAGTATAATGCTATAGCCAAAAAATGGGAATCTGTTACTGTTGAAGATCTCAATATTGATGAAGATGAGTTCCTAGTTGTTAACTGTTTGTATCGAGCAAAAAATTTACTTGATGAGAGTGTTTCTACTGAGAGTGCTAGAAATACTGTTCTTAAATTGGTTCACAAAATTAGTCCTAACTTATTCATCAGTGGCATTGTCAATGGGGCATATAATGCTCCTTTCTTTGTTACTCGATTCCGAGAGGCTTTGTTTCACTTTTCTGCTATTTTTGATATGCTTGAAACCGTTGTACCTCGCGAGGATTATGAGAGAATGCTGTTGGAGAGAGAGATTTTTGGCAGGGAAGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCGGAAACATACAAGCAGTGGCAATTTCGGATCATGAGGGCTGGATTTGTGCAACTGCCTTTTGCTCCTGAGATTTTTGAGAGAGCAGTTGAAAAGGTACAATCAAGTTACCACAGAGATTTTCTGATTGATGAAGATAGCAGATGGTTACTTCAGGGTTGGAAAGGTCGAATTATATATGCCATCTCTACATGGAAACCTTCTGTCGAGTAA 2265 41.5 MTPDRELRKSGRYIDNRPFGIQAQEGTHGRPRFQNTIFSHNFQEFDCLLPNPSPSNIASSSSIRTSSSNDASHEEDYLEDCDFSDAVLTFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEVLGKKYPPSPEVNRSLANQYTDSLNEELCGDSSNYLSNYSNTSYRGDDDPQTLSADVFQIRSALGDTISPSSNSSSNSVISGGDGWVDFSNNTIQVPEPNNRSQSIWQFQKGFEEASKFLPGGNKLCLDFEVNGSATQGPDEGTSQIYLKAARKDQRNVFSPESRGRKNPHDENGDLEEERSSKQAAVFAESPLRSEMFDIVLLCSAGEGHERLVSFRQELHDAKIKSMLQSGQLKVSNGGRGRRKKQSAKKEVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGSQRLASCFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTIMIAAESATRLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLAAYAESFNVPFEYNAIAKKWESVTVEDLNIDEDEFLVVNCLYRAKNLLDESVSTESARNTVLKLVHKISPNLFISGIVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDYERMLLEREIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFVQLPFAPEIFERAVEKVQSSYHRDFLIDEDSRWLLQGWKGRIIYAISTWKPSVE* 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26695033 26697297 + Chy4G088710.1 Chy04g02153 226052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02153 754 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 751 IPR005202 -
Chy04g02153 754 ProSiteProfiles GRAS family profile. 370 750 IPR005202 -
Chy04g02153 754 MobiDBLite consensus disorder prediction 274 307 - -
Chy04g02153 754 Pfam GRAS domain family 379 750 IPR005202 -
Chy04g02153 754 MobiDBLite consensus disorder prediction 278 307 - -
Chy04g02153 754 PANTHER SCARECROW-LIKE PROTEIN 9 37 751 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02153 Chy-Chr4:26695033 Chy03g00094 Chy-Chr3:912130 3.01E-67 dispersed
Chy01g01757 Chy-Chr1:23270371 Chy04g02153 Chy-Chr4:26695033 2.72E-33 transposed
Chy02g00456 Chy-Chr2:2851400 Chy04g02153 Chy-Chr4:26695033 2.71E-61 transposed
Chy02g02635 Chy-Chr2:29429831 Chy04g02153 Chy-Chr4:26695033 9.95E-57 transposed
Chy06g01877 Chy-Chr6:22636667 Chy04g02153 Chy-Chr4:26695033 1.54E-67 transposed
Chy11g00700 Chy-Chr11:8882365 Chy04g02153 Chy-Chr4:26695033 1.46E-72 transposed
Chy11g01219 Chy-Chr11:18370398 Chy04g02153 Chy-Chr4:26695033 0 wgd
Chy12g00215 Chy-Chr12:2538666 Chy04g02153 Chy-Chr4:26695033 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17948 PF03514 GRAS 3.60E-117 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02153 - - csv:101205887 1461.05