Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g02165 | ATGGGTTCCTCCAAGTTTCTCATCGCTATGGCTTCTAATTTTGATCGCCCCTTACGAAGAAATGGTGCTTATGATGCTCGGTTCCACGGAAGAGAGATGAACAAAAATCCCATGCTTTTCAATCTCTCAATTGTGGTGTCTCTGCTTCTAGTCTCAGTAGTCTCATCAGCTGCTTCTAAAGATACTGATTTCATCTTCCATGGCTTCCAATCTGCAAATCTATCACTCGATGGTATGGCTGTTGTTACCTCAAATGGCCTCTTGAAACTGACCAACGAGACCAGGCAAAAAATTGGCCATGGCTTTTATCCAAATCCTGTAAATTTTGTCAATTTCTCTCATGGCGTTTCATCTTTCTCAAGTACTTTTGTCTTTGCCATTATTTCTGAATACCCAAATCTAAGTGGCCATGGAATTGCATTTGTGGTGGCTCCGACGAAAACTTTCCCCGGAGCTGAGCCAAGTCAGCATCTTGGCATTTTTAATGACAACAACAACGGTAACACAAACAACCATATTTTCGCTGTAGAACTCGATACAATTCAGAATCTAGAGTTGAAAGATATAGATGCGAATCATGTTGGTATAGATATAAATGGGTTGATTTCTAAGAAAGCTGAAACTGCTGGGTTTTATCCTTACAACAATGGGGAATTCAGAAATTTGAGTCTTATAAGTGGCCAACCAATGCAAGTTTGGATCGAATATGATGGTATCAACAAAGAGATCAATGTCACTTTGGCACCAATTAACATACCCAAACCCAAAATTCCACTTTTTTCTTACGACTGGGACCTTTCGTCCATTATAAAAAACTCTTCCATGTTCGTCGGGTTTTCATCCTCCACTGGCTCTGTTTCAACTTCTCATTATATTTTAGGTTGGAGTTTCAGATTAAACGGACAAGCTCAAAGTCTTGACATTTCTCGTCTTCCAAAGCTGCCTCAGAAAAAATATAGATCCAAAGTTTTAACAATTGGGTTGCCTTTAATTTCTGGAGGGATTGTTTTATTGGTTATTTTAGGCATTGTTCATGTTATCAGAAGGAAGAGGAAGTTCGCCGAGCTGCTCGAAGATTGGGAGCTTGATTATGGGCCTCATAGGTTCAAATACAAAGACTTATACACAGCTACAAATGGATTTAAAGAAAAAGAAATTCTGGGTTCTGGAGGATTTGGACGAGTCTACAAAGGTGTATTACCAAAATCAAAACTTGAAATAGCTGTAAAGAGGGTATCTCATGAATCAAGACAAGGAATGAAAGAATTTGTAGCTGAGATAGTTAGTCTTGGGAGGCTTCGTCACAGAAACCTTGTACAACTTTTAGGCTACTGTAGACGAAAAGGAGAGCTGCTTTTAGTATATGATTATATGCAAAATGGAAGCTTGGACAAGTACCTGTTTAACGAAACAAATCCAAGTTTGAACTGGAGCCAGAGATTTCGAATCATTAAAGGAGTGGCTTCAGGGCTGCTTTACCTGCATGAAGAATGGGAGCAAATTGTTATTCACAGAGATGTAAAAGCCAGTAATGTCTTACTAGACAATGAGTTAAATGGAAGATTAGGAGATTTCGGTTTAGCAAGACTGTATGATCATGGAACAGACCCTCAAACAACTCATATTGTAGGAACACTCGGATATTTGGCTCCAGAGCACACGAGATCCGGCAGGCCGACGACTCAAATGGATGTGTTTGCTTTTGGGACATTTCTGCTGGAAGTAGCAACAGGAAAGAGGCCAATAGAGATTCGAGGGATGATGGAAGATGTAATATTGCTGGATTGGGTATTGTTATGTTGGATGAGAGGAGCCATTGTTGAGGCCAAAGATCCAAAGTTGGGAACAGAGTATGTGACAGAGGAGATGGAAATGGTTCTGAAACTTGGATTGTTGTGTTCACAATCTAACCCAATGGCGAGGCCAAGCATGAGGCAAATTGTGCAGTACTTGGAAGGAGATGCTGTCATGCCAGTGATGGGTTCTATAGAAACGTTAGGTGGTGGTGGTGGATATGAAGGTTTTGATGATCTTGCCATGTCGTATAATTCTTTTTTGGATAAAGCTATTGCATATTCTACTTCTTCATTTGAGAGAGGTTTTGCCCATTCTTCTGATGCGCAGTCTCTCCTGTCAGGTGGCCGTTGA | 2148 | 40.46 | MGSSKFLIAMASNFDRPLRRNGAYDARFHGREMNKNPMLFNLSIVVSLLLVSVVSSAASKDTDFIFHGFQSANLSLDGMAVVTSNGLLKLTNETRQKIGHGFYPNPVNFVNFSHGVSSFSSTFVFAIISEYPNLSGHGIAFVVAPTKTFPGAEPSQHLGIFNDNNNGNTNNHIFAVELDTIQNLELKDIDANHVGIDINGLISKKAETAGFYPYNNGEFRNLSLISGQPMQVWIEYDGINKEINVTLAPINIPKPKIPLFSYDWDLSSIIKNSSMFVGFSSSTGSVSTSHYILGWSFRLNGQAQSLDISRLPKLPQKKYRSKVLTIGLPLISGGIVLLVILGIVHVIRRKRKFAELLEDWELDYGPHRFKYKDLYTATNGFKEKEILGSGGFGRVYKGVLPKSKLEIAVKRVSHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDYMQNGSLDKYLFNETNPSLNWSQRFRIIKGVASGLLYLHEEWEQIVIHRDVKASNVLLDNELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHTRSGRPTTQMDVFAFGTFLLEVATGKRPIEIRGMMEDVILLDWVLLCWMRGAIVEAKDPKLGTEYVTEEMEMVLKLGLLCSQSNPMARPSMRQIVQYLEGDAVMPVMGSIETLGGGGGYEGFDDLAMSYNSFLDKAIAYSTSSFERGFAHSSDAQSLLSGGR* | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26757558 | 26759705 | - | Chy4G088830.1 | Chy04g02165 | 226064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g02165 | 715 | SUPERFAMILY | Protein kinase-like (PK-like) | 357 | 652 | IPR011009 | - | |
Chy04g02165 | 715 | Gene3D | Phosphorylase Kinase; domain 1 | 366 | 457 | - | - | |
Chy04g02165 | 715 | ProSiteProfiles | Protein kinase domain profile. | 381 | 660 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02165 | 715 | CDD | STKc_IRAK | 387 | 653 | - | - | |
Chy04g02165 | 715 | Pfam | Protein kinase domain | 381 | 649 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02165 | 715 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE | 46 | 663 | - | - | |
Chy04g02165 | 715 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 502 | 514 | IPR008271 | GO:0004672|GO:0006468 | |
Chy04g02165 | 715 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 62 | 318 | IPR013320 | - | |
Chy04g02165 | 715 | Gene3D | Transferase(Phosphotransferase) domain 1 | 458 | 657 | - | - | |
Chy04g02165 | 715 | SMART | serkin_6 | 381 | 651 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02165 | 715 | CDD | lectin_legume_LecRK_Arcelin_ConA | 62 | 301 | IPR001220 | GO:0030246 | |
Chy04g02165 | 715 | Gene3D | - | 60 | 312 | - | - | |
Chy04g02165 | 715 | PANTHER | - | 46 | 663 | - | - | |
Chy04g02165 | 715 | ProSitePatterns | Protein kinases ATP-binding region signature. | 387 | 410 | IPR017441 | GO:0005524 | |
Chy04g02165 | 715 | Pfam | Legume lectin domain | 62 | 312 | IPR001220 | GO:0030246 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy04g02165 | Chy08g00734 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00340 | Chy-Chr1:2481488 | Chy04g02165 | Chy-Chr4:26757558 | 1.13E-157 | dispersed | |
Chy04g02165 | Chy-Chr4:26757558 | Chy04g02167 | Chy-Chr4:26764412 | 0 | dispersed | |
Chy04g02165 | Chy-Chr4:26757558 | Chy04g02166 | Chy-Chr4:26760816 | 0 | tandem | |
Chy05g00555 | Chy-Chr5:6050804 | Chy04g02165 | Chy-Chr4:26757558 | 1.92E-18 | transposed | |
Chy06g01890 | Chy-Chr6:22748430 | Chy04g02165 | Chy-Chr4:26757558 | 8.82E-119 | transposed | |
Chy09g00075 | Chy-Chr9:676279 | Chy04g02165 | Chy-Chr4:26757558 | 1.42E-180 | transposed | |
Chy04g02165 | Chy-Chr4:26757558 | Chy08g00732 | Chy-Chr8:15093249 | 6.93E-22 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71228 | PF00069 | Pkinase | 7.90E-48 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g02165 | - | - | csv:116402748 | 1311.59 |