Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02166 ATGGCGAACTTCTGTTTCTTTTCTTTCTTCGCCACTTTCTTCTTTACTGTCCCAGCCGCATCTCACAACTTCTTCTACGCCGGTTTTCGCGACCCCACCGCAGCCACCAACTTAACCCTACCGGATATCGCCAAAATCGAAGAGAACGGACTCTTGAAGCTCACAGACGATGGCGGATTTCAACAGGGCCATGTGTTCTACGAATCCCCTGTTCGCTTTAAAAACTCTTCCAACGCCGATTCTTTTTCCTTCTCTACCAATTTTGTTTTCGCCATTGTCAACGAATTCCCGAATCTCGGTGGCCATGGCCTCGCCTTCACCATTGCGCCCTCCAAAAACCTCCATGCGCGTCCCGCAGAGTTTTTAGGCCTTCTCAATGAGACCAATCACGGAGACCCCTCGAACCATTTATTTGCTGTTGAGTTCGACACCTTGAAAAATGCACATTTTGAGGACATCGACGACAACCACATTGGAATTGATCTCAATAGTTTGATCTCCAGTGCCTCTACTACAGCCTCTTATTTCATTAACGACGGGAACACCAAGCAATTTATAAACCTAAAAAGTGGGGCACCAATTCAAGTTTGGATTGATTATGATGCCCCTGTAAATTCCCTCACGGTGGCCCTTTCTCCATTTTCCACCAAACCCCAGAAGCCAATTCTGTCGTTTAATGTCGATCTCTCTCCGATTCTTTTGGAGTTCATGTACATTGGGTTCTCGGCCTCCACGGGCCAAATGTCGAGTTCTCATTATATTTTAGGTTGGAGTTTCAGTACGGATGGACCAGCCCAGTCACTGAATATTGATTCTCTGCCTTCGGTTCCCGGGCCGAAGAATACATACTCTGATTTAGCAATTGGGATTTCAATTCTCATCATTTTGATTGTCATTGCTGGAATCTTTCTTACTCTTTACAGAATAAAAAAGAAGATAGACATAATCGAAGCCTGGGAGCTTGAAATTGGTCCGCATCGGTACCCTTACAAACAACTGGAACTAGCAACCAAACAATTTAGCAACAGAGAGCTACTAGGACGTGGCGGATTTGGAAAAGTTTACAGAGGAATATTGCCAAATTCAAAAACCCGCGTGGCTGTGAAGCGAATTTCCCACGAATCCAAGCAGGGCCTCCGTGAATTTATGTCGGAAATCACAATCATCGGTCGGCTTCGTCACCGGAACTTGGTTCAATTACTGGGATGGTGTCGTCATGGTGGAAATGAAGATCTGCTTCTTGTTTACGAGTTTATGGCAAATGGGAGTTTGGATAGTTACATATTCGGCAAACCAGAAGTGATTTTGAGTTGGAAACAAAGGTTTAAGATCATAAACGGCGTTGCTTCCGGCCTCCTATACTTGCACGAAGGATACGAACAGGTGGTCATTCATCGAGATGTGAAGGCCAGCAATGTTTTACTCGACGACGAAATGAACGGAAAACTAAGCGATTTCGGCCTCGCCAAACTCTATGAACACGGCGAGAATCCGACAACAACACGGGTCGTCGGAACTGTCGGCTACCTAGCGCCGGAGCTGCACAGAACCGGAAAAGCCACAACCAGCTCTGATGTTTACGCGTTCGGCGCACTCGTGCTTGAAGTGGCCTGCGGCCGCCGGCCAATCGGCCCGAGGGAGGTGCCGGAAGAGATAGTACTGGTGGACTGGGTTTGGGAGAAGTACAAAGAGAAGAAATTATTGGAAGTAATGGACGAGAAATTGAAGGGGGATTTCAATGAGGTCGAGGCAGTGATGATTTTGAAATTGGGGTTGCTGTGTTCGAAGGATACAGCAGCGGCGCGGCCGAGTATGCGTCTTGTGATGCGGTGTTTGGACGGTGAGATTGGAGTTCCCGACGAGATTACGGGTCCGAGAATGGTGGAAGGAGTCGATGAATTTGTGGATTCGGGGAGTGATAACAGAGACATCACTTTTGCTTCTTTATCCACTTCGTCTCTTTCGATTCTCGACGGTAGAAGTTGA 1986 47.18 MANFCFFSFFATFFFTVPAASHNFFYAGFRDPTAATNLTLPDIAKIEENGLLKLTDDGGFQQGHVFYESPVRFKNSSNADSFSFSTNFVFAIVNEFPNLGGHGLAFTIAPSKNLHARPAEFLGLLNETNHGDPSNHLFAVEFDTLKNAHFEDIDDNHIGIDLNSLISSASTTASYFINDGNTKQFINLKSGAPIQVWIDYDAPVNSLTVALSPFSTKPQKPILSFNVDLSPILLEFMYIGFSASTGQMSSSHYILGWSFSTDGPAQSLNIDSLPSVPGPKNTYSDLAIGISILIILIVIAGIFLTLYRIKKKIDIIEAWELEIGPHRYPYKQLELATKQFSNRELLGRGGFGKVYRGILPNSKTRVAVKRISHESKQGLREFMSEITIIGRLRHRNLVQLLGWCRHGGNEDLLLVYEFMANGSLDSYIFGKPEVILSWKQRFKIINGVASGLLYLHEGYEQVVIHRDVKASNVLLDDEMNGKLSDFGLAKLYEHGENPTTTRVVGTVGYLAPELHRTGKATTSSDVYAFGALVLEVACGRRPIGPREVPEEIVLVDWVWEKYKEKKLLEVMDEKLKGDFNEVEAVMILKLGLLCSKDTAAARPSMRLVMRCLDGEIGVPDEITGPRMVEGVDEFVDSGSDNRDITFASLSTSSLSILDGRS* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26760816 26762876 - Chy4G088840.1 Chy04g02166 226065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02166 661 Pfam Legume lectin domain 22 273 IPR001220 GO:0030246
Chy04g02166 661 Gene3D - 20 262 - -
Chy04g02166 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 279 IPR013320 -
Chy04g02166 661 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Chy04g02166 661 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Chy04g02166 661 SMART serkin_6 340 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02166 661 CDD STKc_IRAK 346 614 - -
Chy04g02166 661 PANTHER - 6 634 - -
Chy04g02166 661 Gene3D Phosphorylase Kinase; domain 1 326 418 - -
Chy04g02166 661 CDD lectin_legume_LecRK_Arcelin_ConA 23 263 IPR001220 GO:0030246
Chy04g02166 661 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 634 - -
Chy04g02166 661 ProSiteProfiles Protein kinase domain profile. 340 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02166 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Chy04g02166 661 SUPERFAMILY Protein kinase-like (PK-like) 322 618 IPR011009 -
Chy04g02166 661 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02166 Chy08g00732 CCT
Chy04g02166 Chy08g00732 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02166 Chy-Chr4:26760816 Chy09g00075 Chy-Chr9:676279 2.09E-177 dispersed
Chy04g02165 Chy-Chr4:26757558 Chy04g02166 Chy-Chr4:26760816 0 tandem
Chy04g02166 Chy-Chr4:26760816 Chy04g02167 Chy-Chr4:26764412 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71229 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02166 - - csv:101204442 1251.88