Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02245 ATGGCTTCTTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCACCGAGGAACCGGCAGAAGGTGAGAATCAGGGAGTTTTAAGGGATGGCACCAATGTTGCAATCAAATCACTGTCTGCAGAATCAACTCAAGGAACTCGGGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAAAATCTCGTTCAACTGATTGGTTGTTGCATCGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGTACAATGAGTAAACATGTTGATCTGGATTGGCCAAAGAGAGCTAAGATCTGTCTTGGTACAGCTTTGGGTCTTGCATTTCTACATGAGGAAGCTGAACCGTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGATAACGTTACTCATGTGAGCACTCGAGTTGCTGGAACTGTCGGATATTTGGCACCCGAGTATGCACTTTTAGGACAGTTGACAAAGAAAGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAGTTAGTGGAAGTAGCAGCAGTAAAACAGCATTCGGAGAAGAGTTGTCGATTCTCGTGGAATGGACTTGGAAATTAAAACAAGAAGGACGGCTTGTAGAACTAATCGATCCGGAACTGATCGATTATCCGAAGGCCGAGGTGATGCGTTTCATCACGGTTGCACTCTTCTGTACCCAAGCCGCTGCAAATCAAAGGCCAAGCATGAAGCAAGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTTTTGACAGAGCCTGGAATATACAAAGGACACAAAATTAGTAAGTTAAATGGCGCTGGCACTAGTTCTGAAGGAACTTCCTCCCATGGACACAGAGGTAAAAAGGTTATAAAGTCTTCTACATCTTCACCCCAATTTAATAGCTCAAATAGTATGACTCAAATGCTTCCTAGGTAA 1047 41.93 MASCCFAILNCCKGNSSTEEPAEGENQGVLRDGTNVAIKSLSAESTQGTREFLTEINMISNIRHQNLVQLIGCCIEGTHRILVYEYLENNSLASTLLGTMSKHVDLDWPKRAKICLGTALGLAFLHEEAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVVSGSSSSKTAFGEELSILVEWTWKLKQEGRLVELIDPELIDYPKAEVMRFITVALFCTQAAANQRPSMKQVVEMLSREVHLNEKLLTEPGIYKGHKISKLNGAGTSSEGTSSHGHRGKKVIKSSTSSPQFNSSNSMTQMLPR* 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27168290 27171285 - Chy4G089630.1 Chy04g02245 226144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02245 348 ProSiteProfiles Protein kinase domain profile. 1 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02245 348 MobiDBLite consensus disorder prediction 327 348 - -
Chy04g02245 348 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 344 - -
Chy04g02245 348 MobiDBLite consensus disorder prediction 303 348 - -
Chy04g02245 348 Gene3D Transferase(Phosphotransferase) domain 1 88 294 - -
Chy04g02245 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Chy04g02245 348 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 28 344 - -
Chy04g02245 348 SMART serkin_6 6 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02245 348 SUPERFAMILY Protein kinase-like (PK-like) 28 281 IPR011009 -
Chy04g02245 348 Pfam Protein tyrosine and serine/threonine kinase 32 281 IPR001245 GO:0004672|GO:0006468
Chy04g02245 348 Gene3D Phosphorylase Kinase; domain 1 26 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02245 Chy-Chr4:27168290 Chy12g00947 Chy-Chr12:14797602 2.17E-133 dispersed
Chy04g02245 Chy-Chr4:27168290 Chy07g00996 Chy-Chr7:14682016 3.93E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71240 PF07714 PK_Tyr_Ser-Thr 1.90E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02245 - - csv:101218048 650.588