Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g02257 | ATGGAAATTCCTTCCACCACTCCCAAAACTGTCGAAGAAATTTTCAAAGATTACACTGCTCGTCGTACCGCTCTTGTTCGCGCCCTTGCTCACGATGTTGATGAATTCTACAGCCTTTGTGATCCAGATAAGGAAAATTTGTGTCTATATGGACATCCTAATGAAACATGGGAAGTGGTTCTTCCAGTAGAAGAGGTTCCACCGGAGCTTCCTGAGCCTGCCCTTGGAATTAATTTTGCAAGAGATGGCATGAACAGAAAAGATTGGCTATCTCTTGTTGCTGTACATAGTGATTCCTGGTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGGCTTAACCGAAACGAAAGAAAGCGTTTATTTAGCTTGATGAATGATCTTCCCACTGTATTTGAAGTTGTGACAGAACGAACGCCTGTCAAAGAGAAGCCTAGTGTAGACAGTGGAAGTAGATCACAAGGAAGCTCTAAGAGATCCAACGATGGGCAGGTGAAAAGCAACCCAAAACTTGCTGAACAGAGTTGCGAGGAGGATGTCGATGAACACAGTGAAACCCTCTGTGGTAGCTGTGGTGAAAATTACAGTGCAGATGAGTTCTGGATCGGCTGTGACATCTGCGAAAGGTGGTACCACGGAAAGTGCTTAACATGTTTACATTCTCATGGGTATGTTGGATCCTGA | 681 | 44.35 | MEIPSTTPKTVEEIFKDYTARRTALVRALAHDVDEFYSLCDPDKENLCLYGHPNETWEVVLPVEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYFGARLNRNERKRLFSLMNDLPTVFEVVTERTPVKEKPSVDSGSRSQGSSKRSNDGQVKSNPKLAEQSCEEDVDEHSETLCGSCGENYSADEFWIGCDICERWYHGKCLTCLHSHGYVGS* | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27226324 | 27228549 | + | Chy4G089750.1 | Chy04g02257 | 226156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g02257 | 226 | MobiDBLite | consensus disorder prediction | 145 | 170 | - | - | |
Chy04g02257 | 226 | PANTHER | CPG BINDING PROTEIN | 5 | 216 | IPR045104 | GO:0006355|GO:0042393 | |
Chy04g02257 | 226 | SUPERFAMILY | FYVE/PHD zinc finger | 176 | 219 | IPR011011 | - | |
Chy04g02257 | 226 | MobiDBLite | consensus disorder prediction | 138 | 175 | - | - | |
Chy04g02257 | 226 | Pfam | Alfin | 10 | 135 | IPR021998 | GO:0006355|GO:0042393 | |
Chy04g02257 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 177 | 222 | IPR013083 | - | |
Chy04g02257 | 226 | PANTHER | ZINC FINGER, FYVE/PHD-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE, ALFIN-RELATED | 5 | 216 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02257 | Chy-Chr4:27226324 | Chy06g01612 | Chy-Chr6:18609086 | 5.90E-74 | dispersed | |
Chy10g00423 | Chy-Chr10:10085746 | Chy04g02257 | Chy-Chr4:27226324 | 2.70E-109 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g02257 | - | - | csv:101211970 | 409.068 |