Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02281 ATGGCTATGGGATTTTCTTTACCTTGCCTTGTGATATTATTTTTCTATGTAGCTGTTCTTTGTGTTCAAGCTCCATTTGTCTACCATGGATTCAATAATTCAAGTTTGCTCCTTGATCAAGGAGCTTCTATAGAGCCTTCTGGCTTGTTAAGACTAACCGACAGCTCCCAGTACGTTATTGGCCGTGCCTTCTATCCTAATACCCAGCCGATGTTTGATATAAATTCTGAACCAGCTTCAGACGTTTCTTCTTTCAGCACATCTTTTGTGTTTGCGATAGTTCCATCAAGCTCTGGTCCACCAGTTGGGTATGGCCTCGCTTTTGTTATGGCTCCATCAACCCATTTTCCAGGTGCTGCAAGTGAACATTACTTGGGATTATTCAACCCCTCCAACAATGGTGACCCTTCGAATCATATTTTTGCAGTCGAATTTGATACTGTTAATGGCCACGATGACGAAACGAATTTTAAAGGCAACCATGTTGGAATCAACAAGAATGGTGTGCGATCAAGTGCGTCTGAATCGGCTGAGTATTCTGACTATGGCTCTGATGTGAAGACGGAGGTGTATTTGGATACCGGTGATCTAATCCAAGCTTGGATTGATTATGATGGCCGTAGTAAGGTAGTGAATGTCACAATAGCTCCAGCAAGTGTAATCAGACCAACTGAGCCATTGATTTCATATCCCATTAACTTGACTTCAGTTTTGAATGAGAGGATGTTTGTGGGATTCTCTGCATCAACTGGAAAAGAAACAAGCTTTCACTACATTTCAGGTTGGAGTTTTGCAATCAACGAATCAGCACCTCAGTTAGATGTTTCTCGACTTCCTCCACCACTGAAAGTGCAAAGTCCTCCGCCTTCATCGCCGTCAACATTCAATCCTCTAGTCACTGTTGTTGTTCCAATATTATCTGCCATGACACTCATGTTAATTTTGTTCTTAGCCTCCATTTTCAGAAGAAGATTGCGAGGTGAGAACCTTGAAGAATGGGAAAGAGATTGTCCTCACAGATTTAGTTATAGAGATCTTTACAAAGCAACAAAGGGATTTAAAGACTCCGAGCTCATCGGATCGGGAGGCTTTGGCTCAGTATACAGAGGTGTCTTACCTTCCACAGGATGTGAAATTGCTGTAAAGAAGATAACAAGAAATGCGAGTCAAGGAATGAGGGAATTCGCTGCAGAAATTGAAAGTTTGGGCCGACTAAGACACAAGAACTTGGTAAATCTCCAAGGATGGTGCAAGAAACAGAACGATCTTCTCTTGGTTTATGACTATGTTCCAAACGGAAGCTTGGATTCTCTCCTTTACCATCCAAAAGACAACTTCTTACTGAATTGGGAACAAAGAATCAACATCCTCAAAGGAGTTGCTGGTGGATTGTTATACTTACACGAAGAATGGGAACAAGTCGTGATCCATCGAGATGTTAAGCCAAGTAATATATTGATAGATATTAGCATGAATGCTCGACTAAGCGACTTCGGCCTTGCAAGGTTATACGACCATGACCAAATATCACATACAACCAGCGTGGTTGGCACAATCGGGTACATCTCACCCGAGTTGGCTCGCACCGGAAAAGCATCGAAAACTACAGATGTCTTTGCCTATGGGGTACTAATTCTTGAAGTGGCTTGTGGAAGAAGACCTCTAGAATCAGATATATTCATATTGGTTGATTGGGTAATGGAATGCCATGAAAAAGGTCGTATTCTTGATGCAGCTGATCCAAAGTTGAATGAAATTTATGACATGGTTGAGATGGAAATGGTTTTGAAACTTGGACTTCTTTGTTCCCATTACAACCCTGAATCTAGGCCAAGCATGAGGCAAGCCACAAGGTTTCTTAATGGAGAAGACCAAATTCTTGCTTTTGATCCTTCACCTTATTCTCAAATCACATTTCAATCAAGCTCCGGATTCACTCAATTTATTCCACCTTCTTCACGTACTTCAACCGCCAGTTTTCTCTCTTCAACTTCCATCGATGTAGGCAGGTAA 2013 41.73 MAMGFSLPCLVILFFYVAVLCVQAPFVYHGFNNSSLLLDQGASIEPSGLLRLTDSSQYVIGRAFYPNTQPMFDINSEPASDVSSFSTSFVFAIVPSSSGPPVGYGLAFVMAPSTHFPGAASEHYLGLFNPSNNGDPSNHIFAVEFDTVNGHDDETNFKGNHVGINKNGVRSSASESAEYSDYGSDVKTEVYLDTGDLIQAWIDYDGRSKVVNVTIAPASVIRPTEPLISYPINLTSVLNERMFVGFSASTGKETSFHYISGWSFAINESAPQLDVSRLPPPLKVQSPPPSSPSTFNPLVTVVVPILSAMTLMLILFLASIFRRRLRGENLEEWERDCPHRFSYRDLYKATKGFKDSELIGSGGFGSVYRGVLPSTGCEIAVKKITRNASQGMREFAAEIESLGRLRHKNLVNLQGWCKKQNDLLLVYDYVPNGSLDSLLYHPKDNFLLNWEQRINILKGVAGGLLYLHEEWEQVVIHRDVKPSNILIDISMNARLSDFGLARLYDHDQISHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVACGRRPLESDIFILVDWVMECHEKGRILDAADPKLNEIYDMVEMEMVLKLGLLCSHYNPESRPSMRQATRFLNGEDQILAFDPSPYSQITFQSSSGFTQFIPPSSRTSTASFLSSTSIDVGR* 671
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 27384198 27386210 - Chy4G089990.1 Chy04g02281 226180
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02281 670 Gene3D Transferase(Phosphotransferase) domain 1 430 628 - -
Chy04g02281 670 CDD STKc_IRAK 359 622 - -
Chy04g02281 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Chy04g02281 670 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 11 655 - -
Chy04g02281 670 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02281 670 SUPERFAMILY Protein kinase-like (PK-like) 337 657 IPR011009 -
Chy04g02281 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 281 IPR013320 -
Chy04g02281 670 CDD lectin_legume_LecRK_Arcelin_ConA 26 267 IPR001220 GO:0030246
Chy04g02281 670 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Chy04g02281 670 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02281 670 PANTHER - 11 655 - -
Chy04g02281 670 Gene3D - 23 276 - -
Chy04g02281 670 ProSitePatterns Protein kinases ATP-binding region signature. 359 383 IPR017441 GO:0005524
Chy04g02281 670 SMART serkin_6 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02281 670 Pfam Legume lectin domain 25 278 IPR001220 GO:0030246
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02281 Chy-Chr4:27384198 Chy09g00075 Chy-Chr9:676279 0 dispersed
Chy05g00555 Chy-Chr5:6050804 Chy04g02281 Chy-Chr4:27384198 3.18E-19 dispersed
Chy06g00890 Chy-Chr6:6431981 Chy04g02281 Chy-Chr4:27384198 4.46E-13 dispersed
Chy04g02280 Chy-Chr4:27378991 Chy04g02281 Chy-Chr4:27384198 0 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71243 PF00069 Pkinase 3.90E-51 CL0016 Chy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02281 - - csv:101216151 1263.06