Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g02281 | ATGGCTATGGGATTTTCTTTACCTTGCCTTGTGATATTATTTTTCTATGTAGCTGTTCTTTGTGTTCAAGCTCCATTTGTCTACCATGGATTCAATAATTCAAGTTTGCTCCTTGATCAAGGAGCTTCTATAGAGCCTTCTGGCTTGTTAAGACTAACCGACAGCTCCCAGTACGTTATTGGCCGTGCCTTCTATCCTAATACCCAGCCGATGTTTGATATAAATTCTGAACCAGCTTCAGACGTTTCTTCTTTCAGCACATCTTTTGTGTTTGCGATAGTTCCATCAAGCTCTGGTCCACCAGTTGGGTATGGCCTCGCTTTTGTTATGGCTCCATCAACCCATTTTCCAGGTGCTGCAAGTGAACATTACTTGGGATTATTCAACCCCTCCAACAATGGTGACCCTTCGAATCATATTTTTGCAGTCGAATTTGATACTGTTAATGGCCACGATGACGAAACGAATTTTAAAGGCAACCATGTTGGAATCAACAAGAATGGTGTGCGATCAAGTGCGTCTGAATCGGCTGAGTATTCTGACTATGGCTCTGATGTGAAGACGGAGGTGTATTTGGATACCGGTGATCTAATCCAAGCTTGGATTGATTATGATGGCCGTAGTAAGGTAGTGAATGTCACAATAGCTCCAGCAAGTGTAATCAGACCAACTGAGCCATTGATTTCATATCCCATTAACTTGACTTCAGTTTTGAATGAGAGGATGTTTGTGGGATTCTCTGCATCAACTGGAAAAGAAACAAGCTTTCACTACATTTCAGGTTGGAGTTTTGCAATCAACGAATCAGCACCTCAGTTAGATGTTTCTCGACTTCCTCCACCACTGAAAGTGCAAAGTCCTCCGCCTTCATCGCCGTCAACATTCAATCCTCTAGTCACTGTTGTTGTTCCAATATTATCTGCCATGACACTCATGTTAATTTTGTTCTTAGCCTCCATTTTCAGAAGAAGATTGCGAGGTGAGAACCTTGAAGAATGGGAAAGAGATTGTCCTCACAGATTTAGTTATAGAGATCTTTACAAAGCAACAAAGGGATTTAAAGACTCCGAGCTCATCGGATCGGGAGGCTTTGGCTCAGTATACAGAGGTGTCTTACCTTCCACAGGATGTGAAATTGCTGTAAAGAAGATAACAAGAAATGCGAGTCAAGGAATGAGGGAATTCGCTGCAGAAATTGAAAGTTTGGGCCGACTAAGACACAAGAACTTGGTAAATCTCCAAGGATGGTGCAAGAAACAGAACGATCTTCTCTTGGTTTATGACTATGTTCCAAACGGAAGCTTGGATTCTCTCCTTTACCATCCAAAAGACAACTTCTTACTGAATTGGGAACAAAGAATCAACATCCTCAAAGGAGTTGCTGGTGGATTGTTATACTTACACGAAGAATGGGAACAAGTCGTGATCCATCGAGATGTTAAGCCAAGTAATATATTGATAGATATTAGCATGAATGCTCGACTAAGCGACTTCGGCCTTGCAAGGTTATACGACCATGACCAAATATCACATACAACCAGCGTGGTTGGCACAATCGGGTACATCTCACCCGAGTTGGCTCGCACCGGAAAAGCATCGAAAACTACAGATGTCTTTGCCTATGGGGTACTAATTCTTGAAGTGGCTTGTGGAAGAAGACCTCTAGAATCAGATATATTCATATTGGTTGATTGGGTAATGGAATGCCATGAAAAAGGTCGTATTCTTGATGCAGCTGATCCAAAGTTGAATGAAATTTATGACATGGTTGAGATGGAAATGGTTTTGAAACTTGGACTTCTTTGTTCCCATTACAACCCTGAATCTAGGCCAAGCATGAGGCAAGCCACAAGGTTTCTTAATGGAGAAGACCAAATTCTTGCTTTTGATCCTTCACCTTATTCTCAAATCACATTTCAATCAAGCTCCGGATTCACTCAATTTATTCCACCTTCTTCACGTACTTCAACCGCCAGTTTTCTCTCTTCAACTTCCATCGATGTAGGCAGGTAA | 2013 | 41.73 | MAMGFSLPCLVILFFYVAVLCVQAPFVYHGFNNSSLLLDQGASIEPSGLLRLTDSSQYVIGRAFYPNTQPMFDINSEPASDVSSFSTSFVFAIVPSSSGPPVGYGLAFVMAPSTHFPGAASEHYLGLFNPSNNGDPSNHIFAVEFDTVNGHDDETNFKGNHVGINKNGVRSSASESAEYSDYGSDVKTEVYLDTGDLIQAWIDYDGRSKVVNVTIAPASVIRPTEPLISYPINLTSVLNERMFVGFSASTGKETSFHYISGWSFAINESAPQLDVSRLPPPLKVQSPPPSSPSTFNPLVTVVVPILSAMTLMLILFLASIFRRRLRGENLEEWERDCPHRFSYRDLYKATKGFKDSELIGSGGFGSVYRGVLPSTGCEIAVKKITRNASQGMREFAAEIESLGRLRHKNLVNLQGWCKKQNDLLLVYDYVPNGSLDSLLYHPKDNFLLNWEQRINILKGVAGGLLYLHEEWEQVVIHRDVKPSNILIDISMNARLSDFGLARLYDHDQISHTTSVVGTIGYISPELARTGKASKTTDVFAYGVLILEVACGRRPLESDIFILVDWVMECHEKGRILDAADPKLNEIYDMVEMEMVLKLGLLCSHYNPESRPSMRQATRFLNGEDQILAFDPSPYSQITFQSSSGFTQFIPPSSRTSTASFLSSTSIDVGR* | 671 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27384198 | 27386210 | - | Chy4G089990.1 | Chy04g02281 | 226180 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g02281 | 670 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 628 | - | - | |
Chy04g02281 | 670 | CDD | STKc_IRAK | 359 | 622 | - | - | |
Chy04g02281 | 670 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672|GO:0006468 | |
Chy04g02281 | 670 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED | 11 | 655 | - | - | |
Chy04g02281 | 670 | Pfam | Protein kinase domain | 353 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02281 | 670 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 657 | IPR011009 | - | |
Chy04g02281 | 670 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 24 | 281 | IPR013320 | - | |
Chy04g02281 | 670 | CDD | lectin_legume_LecRK_Arcelin_ConA | 26 | 267 | IPR001220 | GO:0030246 | |
Chy04g02281 | 670 | Gene3D | Phosphorylase Kinase; domain 1 | 338 | 429 | - | - | |
Chy04g02281 | 670 | ProSiteProfiles | Protein kinase domain profile. | 353 | 627 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02281 | 670 | PANTHER | - | 11 | 655 | - | - | |
Chy04g02281 | 670 | Gene3D | - | 23 | 276 | - | - | |
Chy04g02281 | 670 | ProSitePatterns | Protein kinases ATP-binding region signature. | 359 | 383 | IPR017441 | GO:0005524 | |
Chy04g02281 | 670 | SMART | serkin_6 | 353 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g02281 | 670 | Pfam | Legume lectin domain | 25 | 278 | IPR001220 | GO:0030246 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g02281 | Chy-Chr4:27384198 | Chy09g00075 | Chy-Chr9:676279 | 0 | dispersed | |
Chy05g00555 | Chy-Chr5:6050804 | Chy04g02281 | Chy-Chr4:27384198 | 3.18E-19 | dispersed | |
Chy06g00890 | Chy-Chr6:6431981 | Chy04g02281 | Chy-Chr4:27384198 | 4.46E-13 | dispersed | |
Chy04g02280 | Chy-Chr4:27378991 | Chy04g02281 | Chy-Chr4:27384198 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71243 | PF00069 | Pkinase | 3.90E-51 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g02281 | - | - | csv:101216151 | 1263.06 |