Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02286 ATGTCTTCCTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGTCGTCCCCGCCCCCACATCTGGTGGTTCTGTTCAATCTCAAGGCCCTGTCACCACCCCCGCCTTTCGCGCTTTCATTAACCACCTATCCGAATATCTCCGTCACGGTCTCTCCCAGCGAAGACCATGGGCCGAACTTGCAGATCGGACGGCATTTTCTAAGCCTGAATCCTTCTCCGAAGCCACCCTTCGAATTCGCAAGAATTACTCTTATTTTCGCGTCAATTATCTCGCTGTCATTGCTCTGATCCTCGGCTTTTCTCTCGTTTCTCATCCGTTTTCTCTGATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTCCTCTACCTCTTCCGTCCCTCAGATCAGCCCCTTGTTCTATTTGGTCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTTCTCAGCGTGTTCGTCGTATTCCTTACGAGCGTTGGATCCGTCCTCGTTTCGGCTCTTATGGTCGGTGTAGCTCTGGTTTGTGCCCACGGCGCGTTTAGGGTTCCTGAAGATCTCTTCCTAGATGAACAAGAAAATGTATCCACCGGTTTCCTGTCGTTCTTCAGCAGCGCAGCTTCCACCGCCGCCGCCGCCGCCGCGCCTGTGGCTGCTCGCACGGGTTATTTGGCTGTTATTTCACATTTCTTCTTGCTATGTGACCCGAGGATTTGTCACTACCCTCTGAGTGAATTTCAGGTATACCCATTTCAGTTCATGCAGATTCTTTCATCAAAAACTGCTGGTTGGTGCTCTAAATCACCAAATAACAACAGAAAACTCAAGAACCAACAATGGAGAAGCTGTTCTTCGTACCTCATTGCTCTGGTTTTTGCTCTTCTTTTGGCTTGTTCCTTTCGGCCAGTCACTGGCCAGATGTGGGATGGAGTGTCTGTTACTCAAGGCGATTTTCAAGCTCTTCAAGCTATAAAACATGAACTCGTTGATCTAAAAGGAGTTTTGCGTAGTTGGAATGGAAGTAATGGAGCTTGTTCCGGGCAGTGGGTAGGAATCAAGTGCGTGAAAGGGCAGGTTATTGCTATTCAGCTTCCATGGAAGGCTCTCGCCGGCAGGATTTCTGACAGGATTGGGCAGCTCCGGGAGCTTCGGAAGCTTAGCCTCCACGACAATGTGATCTCTGGCGTGATCCCTCGGTCCATCGGGTTCCTTCCAAATCTCAGAGGAATTTATCTTTTCAACAACAGATTATCAGGTTCTATTCCTCCTACTATTGGTCATCTTCCCCTACTTCAAACTCTTGATTTGAGCAACAATTTGCTCACTGGAGAAATTCCTTTCGGTATAGCAAAGTCTACCAAATTGATTAGAGTTAATCTGAGTTACAATTCATTGTCGGGATCCATCCCAACAAGTTTCACACAGTCGTTTTCTCTTATAATTCTCGCCCTTCAGCACAATAATATTTCTGGGACTGTCCCAGATTCTTGGGGAAGTCTTGGAAACAAAACTTGCCCACTTGGGGTTTTGACACTTGATCATAATGCTATATCTGGAGCAATTCCAGCTTCTTTAACTAAATTGGAACGGCTTCAAGAGATTTCCTTCAGTGAGAACAAGATCTCTGGAGCTATACCAGGTGAAATAGGCAGGCTGAAGAGACTTCGTGTTTTGGATTTGTCGAACAACGCCATTAACGGCAGTTTCCCTTCAAGTTTCTCCAATCTCTCCGCTCTTCAGTTATTGAAGGTTGAAAATAATCGTCTTGAAAGCCAGATTCCAGAAGATATTGATAGATTGCACAATCTCTCGGTGGTCAAGCTTGGGAAGAATCGTTTTAGTGGTGAGATTCCTGCAAGTTTTGGGAACATTTCTGCTATTAGCCAACTTGATTTCTCAGAAAATAACTTCAATGGACAGATTCCAACATCATTGACCCGGTTGTTGAATCTAACCTCTTTCAATGTCTCTTACAACAATCTCTCTGGCCCTGTCCCAGTTCTCCTATCAAAAAAGTTCAATGCGAGCTCTTTTGTAGGGAACCTTCAACTGTGTGGTTTTAGTACTTCAACTCCATGCCTACCTGCATCCTCCCCACAGAATATTACTACTCCATCAACTGAGGTCCTGAAACCGCGTCACCACCGCAGACTTAGTGTAAAGGACATAATCCTGATAGCGGCAGGAGCTCTGTTGGTGCTTCTTCTTCTTCTCTGCTCAATTTTGCTCTGTTGTTTATTATCAAAAAGAGCAGCTGCCAGGAAGACTGACAAAACAACTGCCAAGCAAGCTGCTGCCAGAAGCATCGAAAAGGCAGCACCCGGGAGCACAGAAGTTGGAGCAGGTGAAGCTGGTGGAAAACTAGTTCATTTTGACGGGCCATTTGTTTTCACTGCTGATGATCTTCTGTGTGCGACTGCTGAGATCATGGGCAAGAGCACATATGGAACAGCATATAAAGCAACATTGGAAGATGGAAATGAAGTTGCAGTGAAAAGACTGAGAGAAAAAACAACAAAAGGGCACAAGGAATTTGAAACCGAAGTTGCAGGCCTCGGAAAAATTCGACATCCAAATCTACTTGCTCTTAGAGCTTACTACTTAGGCCCCAAAGGAGAGAAGCTCCTGGTCTTTGATTACATGCCTAGAGGAAGCCTCTCTTCTTTCCTTCATGCTCGTGGGCCAGAAACCACGGTCGATTGGCCAACAAGGATGAAAATAGCAATCGGAATCACCCAAGGCTTGAACTACCTCCACACAGAGGAGAATCTTATTCATGGAAACCTCACGTCCAGCAACATTCTGCTGGATGATCAGAGTAATGCTCGTATTGCAGATTTTGGGCTTCCCAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTACAATGCACCAGAGCTAACAAAAACCAAAAAGACCACAACAAAGACAGATGTCTACAGCCTTGGAGTCATAATATTGGAACTCTTGACAGGAAAATCTCCTGGAGAAGCCATGGATGGAATGGACTTACCACAGTGGGTGGCCTCAATAGTAAAGGAAGAGTGGACAAATGAAGTGTTTGATTTGGAGCTTATGAAAGATACACAAAATATTGGTGATGAACTGCTGAACACTTTAAAACTAGCCCTGCATTGTGTTGATCCGTCACCAACTGCTCGGCCAGATGTTCAGCAGATTCTCCAGCAACTGGAGGAAATCAATGCTTCTACTTCCGGTGACGACGGTGCCAAAAATCAACCAGAAAATGAATAG 3291 45.94 MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVLSVFVVFLTSVGSVLVSALMVGVALVCAHGAFRVPEDLFLDEQENVSTGFLSFFSSAASTAAAAAAPVAARTGYLAVISHFFLLCDPRICHYPLSEFQVYPFQFMQILSSKTAGWCSKSPNNNRKLKNQQWRSCSSYLIALVFALLLACSFRPVTGQMWDGVSVTQGDFQALQAIKHELVDLKGVLRSWNGSNGACSGQWVGIKCVKGQVIAIQLPWKALAGRISDRIGQLRELRKLSLHDNVISGVIPRSIGFLPNLRGIYLFNNRLSGSIPPTIGHLPLLQTLDLSNNLLTGEIPFGIAKSTKLIRVNLSYNSLSGSIPTSFTQSFSLIILALQHNNISGTVPDSWGSLGNKTCPLGVLTLDHNAISGAIPASLTKLERLQEISFSENKISGAIPGEIGRLKRLRVLDLSNNAINGSFPSSFSNLSALQLLKVENNRLESQIPEDIDRLHNLSVVKLGKNRFSGEIPASFGNISAISQLDFSENNFNGQIPTSLTRLLNLTSFNVSYNNLSGPVPVLLSKKFNASSFVGNLQLCGFSTSTPCLPASSPQNITTPSTEVLKPRHHRRLSVKDIILIAAGALLVLLLLLCSILLCCLLSKRAAARKTDKTTAKQAAARSIEKAAPGSTEVGAGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGHKEFETEVAGLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPRGSLSSFLHARGPETTVDWPTRMKIAIGITQGLNYLHTEENLIHGNLTSSNILLDDQSNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKTTTKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASIVKEEWTNEVFDLELMKDTQNIGDELLNTLKLALHCVDPSPTARPDVQQILQQLEEINASTSGDDGAKNQPENE* 1097
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27406963 27413304 - Chy4G090040.1 Chy04g02286 226185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02286 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 274 1084 - -
Chy04g02286 1096 SUPERFAMILY L domain-like 340 689 - -
Chy04g02286 1096 Gene3D Ribonuclease Inhibitor 507 704 IPR032675 -
Chy04g02286 1096 PRINTS Leucine-rich repeat signature 435 448 - -
Chy04g02286 1096 PRINTS Leucine-rich repeat signature 556 569 - -
Chy04g02286 1096 Pfam Leucine rich repeat N-terminal domain 320 358 IPR013210 -
Chy04g02286 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 274 1084 - -
Chy04g02286 1096 Gene3D Ribonuclease Inhibitor 318 506 IPR032675 -
Chy04g02286 1096 SMART LRR_typ_2 408 431 IPR003591 -
Chy04g02286 1096 SMART LRR_typ_2 384 407 IPR003591 -
Chy04g02286 1096 SMART LRR_typ_2 432 456 IPR003591 -
Chy04g02286 1096 SMART LRR_typ_2 556 579 IPR003591 -
Chy04g02286 1096 SMART LRR_typ_2 580 604 IPR003591 -
Chy04g02286 1096 SUPERFAMILY Protein kinase-like (PK-like) 812 1080 IPR011009 -
Chy04g02286 1096 MobiDBLite consensus disorder prediction 1 31 - -
Chy04g02286 1096 Pfam PRA1 family protein 54 196 IPR004895 -
Chy04g02286 1096 Gene3D Phosphorylase Kinase; domain 1 814 885 - -
Chy04g02286 1096 Gene3D Transferase(Phosphotransferase) domain 1 886 1094 - -
Chy04g02286 1096 CDD STKc_IRAK 814 1079 - -
Chy04g02286 1096 ProSiteProfiles Protein kinase domain profile. 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02286 1096 Pfam Leucine rich repeat 385 445 IPR001611 GO:0005515
Chy04g02286 1096 Pfam Leucine rich repeat 513 569 IPR001611 GO:0005515
Chy04g02286 1096 Pfam Protein tyrosine and serine/threonine kinase 812 1076 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02286 Chy08g00606 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02286 Chy-Chr4:27406963 Chy02g01942 Chy-Chr2:22846973 1.53E-22 dispersed
Chy11g00555 Chy-Chr11:6176636 Chy04g02286 Chy-Chr4:27406963 5.82E-27 dispersed
Chy01g01352 Chy-Chr1:17965266 Chy04g02286 Chy-Chr4:27406963 1.89E-19 transposed
Chy01g01617 Chy-Chr1:22094064 Chy04g02286 Chy-Chr4:27406963 1.29E-08 transposed
Chy02g01374 Chy-Chr2:10296469 Chy04g02286 Chy-Chr4:27406963 3.77E-07 transposed
Chy03g00032 Chy-Chr3:386518 Chy04g02286 Chy-Chr4:27406963 3.94E-42 transposed
Chy05g00453 Chy-Chr5:4901169 Chy04g02286 Chy-Chr4:27406963 6.10E-14 transposed
Chy07g00488 Chy-Chr7:3905248 Chy04g02286 Chy-Chr4:27406963 1.43E-12 transposed
Chy10g00350 Chy-Chr10:8776131 Chy04g02286 Chy-Chr4:27406963 1.34E-73 transposed
Chy10g00351 Chy-Chr10:8781934 Chy04g02286 Chy-Chr4:27406963 2.73E-90 transposed
Chy12g00082 Chy-Chr12:827270 Chy04g02286 Chy-Chr4:27406963 3.63E-12 transposed
Chy04g02286 Chy-Chr4:27406963 Chy08g00605 Chy-Chr8:13877100 4.42E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71244 PF07714 PK_Tyr_Ser-Thr 7.10E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02286 - - csv:101206358 1605.11