Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g02327 ATGGAGTTACCTGCTGAGCCAGTAGAAATGAGTGGGTTTAAGGGGCATAGACCCGAAAAGGAGGCGATTGGGTTGCTGCAGGTTCTGCGACTGACTCGAGCATTGGACAACGGAAAGCTAACGCGAGTCCGAGTACAAATTTCTGATCCCACAGACGGTAGCGCTGACCTCAACGTTAATGAAAGTCTGGAACAACAATCACCTCTCTCTCCCCCGAGGTCTGCCACTGCTGCTGTCACTGTCAATTCTACAACTACAACAACCATTGCAACATCAGCACACCAGCCAAGCCTACCGCCGTCAGCACTGCTGCATCACAGTCCCAATCACAACTTCAGCCACACCAAACTAAGTGAAGTCGAGATGGGCAACTGCGGTACTAGAGAAGAGTCTGCGGTCGTTTCCAATGCTCAAGTTCAACAGCTGCATACTTCGTCTTCCTTGGCTGTGAAAAACGCCAACAGCAATGCTACAGATAAAAGGCATATTCATAACCGGTCCATATCAGATCTAAGCGATCCTTCAACACCTCGCAACCTCGAGGACTTCAGAAAGAATTCGGTGCTCTACACACATGTCATCGCCTTCACATTATACGAGCTGGAAACGATCACCAAGAGTTTCCGATCCGATTACATTCTCGGAGAAGGCGGTTTTGGAACTGTTTACAAAGGCTACATTGACGAGAACGTCAGGGTTGGCCTCAAATCTCTTCCTGTCGCTGTCAAGGTTCTCAACAAGGAAGGGCTACAGGGCCACCGAGAATGGCTTACAGAAGTCAACTTTCTTGGTCAGCTAAGACATCCACACCTTGTCAAGTTGATTGGTTACTGCTGCGAGGATGATCACAGATTACTTGTCTACGAGTTCATGTTTAGAGGAAGCCTAGAAAACCACCTCTTTCGAAAGACAACTGTTCCGTTGCCATGGGCAAGAAGAATGATGATAGCTCTTGGAGCGGCCAAGGGACTTGCTTTCCTTCATAATGCTGAACGGCCTGTTATCTATCGGGATTTTAAAACCTCTAATATACTATTGGACTCTGACTATACAGCTAAGCTTTCTGATTTTGGGCTTGCAAAAGCTGGACCACAAGGTGATGAGACGCATGTTTCTACTCGAGTAATGGGTACTTATGGTTATGCTGCCCCGGAATATGTCATGACTGGAGAATCAGGATTCATGTTGGTGTTTAAGATCACCACCAAGCCCCTTCACGAAGACGTTCTGTCATTTGACCATTATGAGATGCAAGGGTTTGTCAAGTTGGGAGGGAATGATCAGGCAATTTTTTTCTTAAGCATTGCAGAAATTGCCTTCCAATCATCACGACGTTGTAATCTTGAAATAAAAGTGCATTTCTCATCTACTCTCTTGGCCATTTTTTTGCTAACTTGGCGATTTGACTTATATAGATTGGAAAGTCAATACTCGATTAGGGCAGCACAGAAGGCCTGCAGCCTAGCGTACTATTGTCTGAGCCAGAATCCGAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCATTGCAGAGCGGTAACGATGCAATTGAATATTCATCAATGGGAACTACTCCATTTGTTAGGGGGGGTGTCCCTGATTACAGGATGCGACAAAGGTTTATCAACAATGTTGGTTCAGGGGCTAGTTGTCGGTCTCCTAACCCCAATTGTTCCCCCAACGGCCCCGCTGCTTGTAGGTATCGTAGACATTTTGGAAGATTTTTTTGTCGAAGTAGCATCTCCAATTTGAAGTTGTCCCCGTCGATGACCAAGGCAAAAGATTCAACATCAGATCGGTGCACCCATGCCATTGTTGCTGGTTCTGGTACTGGCAGTGAAGAACGAATATCAAAAATTGTGGTCATGTCTCCTGTGGAAACGCTGCTACTTTTCGCTTTCTTCTACGCTGGAATAGACACAGCCGCAATTAACATTTTGACCTCTAAGAATGTGGCATTAATGCATGAAATTGAGTTTAGTTACATTTTGTACGTTGTTGGTGCAGCTGCTGCGCTGGAATCCTTGCGAAATGAATGGCAAAATACACCACCAAGCTGGGGAGCATCGATTGATCCTTGTGGAACTCCTTGGGAAGGAGTGGCTTGCATCAATTCAAGAGTCACTGCACTGAGATTATCAACTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTGACCGAACTAAAATCATTGGACCTTTCGTTCAATAAAGATCTCACTGGTTCAATCTCTCCAGCATTAGGGGATCTACAGAATTTGAGTATCTTGATCCTAGCTGGTTGTGGCTTCAGTGGCAGTATTCCTGAACAACTGGGCAATCTTTCTAATCTATCCTTCTTGGCTTTAAACTCTAACAACTTTACTGGTACCATACCGCCATCTCTGGGAAAACTCTCCAATCTCTATTGGCTGGACCTGGCTGATAATCAATTGACAGGTAGTCTCCCAGTCTCGACTTCTGAAACTCCTGGTTTGGACCTCCTTCTAAAGGCTAAACACTTTCATTTCAACAAAAACCAGTTGTCAGGTTCCATTTCACCTAAACTTTTTAGGTCTGAAATGGTATTAATACACATATTGTTTGATGGAAATAAATTTTCTGGGAATATCCCACCAACATTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTTGATCGGAATTCCCTGGCAGGAACTGTCCCATCAAATCTGAACAACCTAACAAATATCAATGAATTGAATTTAGCCAACAATAAGTTGACGGGTCCACTGCCAAACTTAACTCAAATGAGCTCACTAAATTATGTGGACCTTAGTAACAATTCATTTGATTCATCAGAAGCTCCCGAATGGTTCTCAAATCTACAATCTCTCACGACTCTGATCATTGAATTTGGTTCAATGCGAGGATCTGTTCCACAAGGAGTGTTTAGTTTACCACAAATACAACAAGTGAAACTGAAGAAGAATGCATTCAGTGACACATTTGATATGGGTGACAAAGTCAGTGAACAGTTGCAGCTCGTTGATTTGCAAAATAACAACATTTCCCATTTTACTCTTGGTTCAAGATATACCAAAACTTTGATGCTTATAGGGAATCCTGTGTGTAGCACTGATGTTACCCTCTCAAATACGAACTACTGCCAAGTTCAAGATCAACCGGTGAAACCCTATTCTACCAGCCTTGCCAGCTGTTTAAGTAAGTCATGTTCTCCGGATGAGAAGTTAAGTCCTCAAAGTTGTGAATGTGCCTATCCATTTGAAGGGACTTTGTACTTTAGAGCACCCTCATTTAGGGATTTGTCCAATGTGACTTTGTTTCATTCATTGGAATTTAGCCTTTGGAAAAAACTGGACCTTACGCCTGGTTCAGTTTCTATTCAAAACCCGTTCTTCAATGTTGACGATTATCTTCAGATACAACTTGCACTTTTTCCGTCCGATGGTAAGTATTTTAACAGGTCAGAGATTCAGAGGATTGGATTTGACTTGAGCAATCAAACCTACAAACCTCCCCATGAATTTGGGCCATTTTATTTCATTGCTTCTCCCTACGGTTTTGCAGGCACAACTAAGGGAACTTCAATCAGCCCTGGAGTGATAATTGGGGTAGCTATTGGTTGTGCCTTCCTCGTTCTAGGCCTCATTGGAGTTGGATTATATGCAATTTGGCAAAAGAAACGTGCAGAAAAGGCCATTGGGTTGAGTCGGCCATTTGCTTCTTGGGCACCAAGTGGCAATGATAGTGGAGGTGCACCACAGTTGAAGGGAGCCCGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAATTTCTCCATGAGCAATGAGGTAGGATCGGGAGGATATGGCAAGGTGTATAGAGGGATGCTTGTGGATGGACAAGCAGTTGCGATCAAAAGAGCTCAGCAAGGATCAATGCAGGGTGGCCTTGAGTTTAAGACGGAAATCGAACTGCTTTCACGAGTTCATCACAAAAACCTCCTTGGCCTGGTGGGATTTTGTTTTGAACAAGGAGAACAGATGCTCGTTTATGAATTTATGCCTAATGGAACACTGAGAGATAGCCTGTCTGGAAAATCTGGTATCAATCTTGATTGGAAGAGAAGACTTCGTATTGCTCTTGGATCTGCGAGAGGATTAGCTTACTTACATGAACTTGCCAATCCTCCCATAATCCATAGGGACGTTAAGTCCACCAATATTCTATTGGATGAACATTTAAATGCAAAAGTTGCAGATTTTGGCTTGTCCAAGCTTGTCTCTGACAATGAAAAGGGACACGTTTCTACTCAAGTTAAAGGAACATTGGGTTATTTGGATCCTGAGTATTACATGACTCAACAGTTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTCGTTATGTTGGAACTATTAACAGGTAAGTTGCCTATCGAGAAAGGAAAGTATGTAGTCCGTGAGGTGCGCATGTTGATGAATAAAAGTGAGGAAGAATATTATGGTCTCAAGCAGATAATGGATGTAACCATTTTAAACAATACAACGACCATTATTGGGCTTGGAAGGTTCTTGGAGTTGGCCATGCGATGCGTGGAGGAGTCAGCTGTAGATCGTCCCACAATGAGTGAAATGGTCAAGGCAATTGAGAGTATTTTGCAGAATGATGGTATTAATACGAACACAACATCTGCATCCTCTTCTGCAACTGACTTTGGGGCTTCCAGAAACGCTCCTAGGCATCCCTACAATGATCCTATACCGAAAAAGGATGCCCATGACAGCAATTCTTTTGATTACAGTGGTGGATACACTCTTTCTACAAAAGTGGAGCCCAAATAG 4833 43.33 MELPAEPVEMSGFKGHRPEKEAIGLLQVLRLTRALDNGKLTRVRVQISDPTDGSADLNVNESLEQQSPLSPPRSATAAVTVNSTTTTTIATSAHQPSLPPSALLHHSPNHNFSHTKLSEVEMGNCGTREESAVVSNAQVQQLHTSSSLAVKNANSNATDKRHIHNRSISDLSDPSTPRNLEDFRKNSVLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPHLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTTVPLPWARRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGESGFMLVFKITTKPLHEDVLSFDHYEMQGFVKLGGNDQAIFFLSIAEIAFQSSRRCNLEIKVHFSSTLLAIFLLTWRFDLYRLESQYSIRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNDAIEYSSMGTTPFVRGGVPDYRMRQRFINNVGSGASCRSPNPNCSPNGPAACRYRRHFGRFFCRSSISNLKLSPSMTKAKDSTSDRCTHAIVAGSGTGSEERISKIVVMSPVETLLLFAFFYAGIDTAAINILTSKNVALMHEIEFSYILYVVGAAAALESLRNEWQNTPPSWGASIDPCGTPWEGVACINSRVTALRLSTMGLKGKLGGDIGGLTELKSLDLSFNKDLTGSISPALGDLQNLSILILAGCGFSGSIPEQLGNLSNLSFLALNSNNFTGTIPPSLGKLSNLYWLDLADNQLTGSLPVSTSETPGLDLLLKAKHFHFNKNQLSGSISPKLFRSEMVLIHILFDGNKFSGNIPPTLGLVKTLEVLRLDRNSLAGTVPSNLNNLTNINELNLANNKLTGPLPNLTQMSSLNYVDLSNNSFDSSEAPEWFSNLQSLTTLIIEFGSMRGSVPQGVFSLPQIQQVKLKKNAFSDTFDMGDKVSEQLQLVDLQNNNISHFTLGSRYTKTLMLIGNPVCSTDVTLSNTNYCQVQDQPVKPYSTSLASCLSKSCSPDEKLSPQSCECAYPFEGTLYFRAPSFRDLSNVTLFHSLEFSLWKKLDLTPGSVSIQNPFFNVDDYLQIQLALFPSDGKYFNRSEIQRIGFDLSNQTYKPPHEFGPFYFIASPYGFAGTTKGTSISPGVIIGVAIGCAFLVLGLIGVGLYAIWQKKRAEKAIGLSRPFASWAPSGNDSGGAPQLKGARWFSYDELKKCTNNFSMSNEVGSGGYGKVYRGMLVDGQAVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKSGINLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDEHLNAKVADFGLSKLVSDNEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELLTGKLPIEKGKYVVREVRMLMNKSEEEYYGLKQIMDVTILNNTTTIIGLGRFLELAMRCVEESAVDRPTMSEMVKAIESILQNDGINTNTTSASSSATDFGASRNAPRHPYNDPIPKKDAHDSNSFDYSGGYTLSTKVEPK* 1611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27652424 27679301 + Chy4G090450.1 Chy04g02327 226226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g02327 1610 SUPERFAMILY Protein kinase-like (PK-like) 1260 1558 IPR011009 -
Chy04g02327 1610 MobiDBLite consensus disorder prediction 1556 1571 - -
Chy04g02327 1610 Gene3D Ribonuclease Inhibitor 929 1066 IPR032675 -
Chy04g02327 1610 ProSiteProfiles Protein kinase domain profile. 208 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02327 1610 MobiDBLite consensus disorder prediction 47 75 - -
Chy04g02327 1610 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 662 1582 - -
Chy04g02327 1610 Pfam Protein kinase domain 211 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02327 1610 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 196 390 - -
Chy04g02327 1610 SMART serkin_6 208 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02327 1610 SMART serkin_6 1275 1550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02327 1610 CDD STKc_IRAK 1281 1549 - -
Chy04g02327 1610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1395 1407 IPR008271 GO:0004672|GO:0006468
Chy04g02327 1610 Gene3D Phosphorylase Kinase; domain 1 174 290 - -
Chy04g02327 1610 Gene3D Ribonuclease Inhibitor 672 863 IPR032675 -
Chy04g02327 1610 MobiDBLite consensus disorder prediction 152 177 - -
Chy04g02327 1610 ProSitePatterns Protein kinases ATP-binding region signature. 1281 1303 IPR017441 GO:0005524
Chy04g02327 1610 PANTHER LRR RECEPTOR-LIKE KINASE 662 1582 - -
Chy04g02327 1610 Gene3D Phosphorylase Kinase; domain 1 1249 1350 - -
Chy04g02327 1610 MobiDBLite consensus disorder prediction 91 112 - -
Chy04g02327 1610 Pfam Protein tyrosine and serine/threonine kinase 1277 1545 IPR001245 GO:0004672|GO:0006468
Chy04g02327 1610 Gene3D Transferase(Phosphotransferase) domain 1 1351 1571 - -
Chy04g02327 1610 Gene3D Transferase(Phosphotransferase) domain 1 291 404 - -
Chy04g02327 1610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Chy04g02327 1610 ProSitePatterns Protein kinases ATP-binding region signature. 214 243 IPR017441 GO:0005524
Chy04g02327 1610 MobiDBLite consensus disorder prediction 1556 1610 - -
Chy04g02327 1610 ProSiteProfiles Protein kinase domain profile. 1275 1550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g02327 1610 Gene3D Ribonuclease Inhibitor 864 928 IPR032675 -
Chy04g02327 1610 PANTHER LRR RECEPTOR-LIKE KINASE 196 390 - -
Chy04g02327 1610 SUPERFAMILY Protein kinase-like (PK-like) 186 515 IPR011009 -
Chy04g02327 1610 SUPERFAMILY L domain-like 679 1052 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g02327 Chy08g00213 CCT
Chy04g02327 Chy08g00213 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g02327 Chy-Chr4:27652424 Chy05g01472 Chy-Chr5:18455181 3.15E-66 dispersed
Chy02g02047 Chy-Chr2:24668507 Chy04g02327 Chy-Chr4:27652424 9.26E-33 transposed
Chy04g01362 Chy-Chr4:20290431 Chy04g02327 Chy-Chr4:27652424 5.22E-14 transposed
Chy06g00160 Chy-Chr6:1035863 Chy04g02327 Chy-Chr4:27652424 1.55E-06 transposed
Chy07g01593 Chy-Chr7:20077965 Chy04g02327 Chy-Chr4:27652424 1.51E-21 transposed
Chy10g00727 Chy-Chr10:13548017 Chy04g02327 Chy-Chr4:27652424 1.02E-46 transposed
Chy11g01190 Chy-Chr11:18061611 Chy04g02327 Chy-Chr4:27652424 1.57E-31 transposed
Chy04g02327 Chy-Chr4:27652424 Chy08g00556 Chy-Chr8:13120571 1.88E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71248 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g02327 - - csv:101220026 1828.53