Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00008 ATGAAACAACGGGCAGGCTTTAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACATCTCTAGCTCTAGCTCCAATGGTTGGATCAGTTTCATCTCCAACGCACCAGTTCCGTGGAATTTCTCCTCAAGACGAGATGTATTACAAGTCGTCCGACACGATCAAATGTAGAGACGGTTCCAAAAAATTTTCCAAGGCTCAGCTTAACGATAATTTCTGCGATTGCCCTGATGGCACTGATGAACCTGGCACATCTGCATGCTCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCATGTTCCACTTTTGTTATTTTCTTCAAGGGTGAACGACAATATTTGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGTCCAAATACGTGTTGGGAGGCTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAGGATTTCAACCTTTGAAGAGGGTGTTAAAATTAGAAAACAAGATGTTGAACATGCAAAAAATGCAATACTCAAAGATGAGGCAGAGCTATTGGAGTTGAAAAATGAGGAAAAAGTATTAAAAGGGCTCGTTGAACAACTTAAAGAGCGCAAAGAGCAAATTGAGAAGGTAGAAGAGGAGGAGCGATTATTGAAAGAAAAAGAAGCAAAGGAACATTTGGAGAGAGAAAAAGATGAGACTAGAAAAATTGAGTCAACAGAAACAACTGATGTTGGGGAAAGCAAAACTCACGAGGAAGACAATTGGAAGAAAAATGAAGCTACAAAAAATTATGACAAGGAGTATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGTAACTGGGCTGACTCTGCTTCAGATAAGCAGGCTAGGATGGAAGAAGTTGATTCAGAACTTGAAGCTCACCTTTCTAATAAACCTGAAACAGAAGCATCATTGCCGAAAGAGGATACAGCAGTAGAGAAGGATCTGCTGGCTAAATCTGAAACTGGAGAAAGTGCTGGCACTAAAGAATCATCCGAAGAAGTCCTGAAAAAGAATGATGGTAGTCCAGAGTTGTCCAAGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAAGAAACAAGGATAGTACGAATGATAGTGATGAAGAAAGTCATGATATCTCAAAAGAAGCCTATGAAAATGACGGTTATGCTTCAGAGACCGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTGGAAGATACCAGAGATGAATTTCATGATGATTCTACTTCATCTGAGAGATATTATTCAGATACAGAATTGGATTCAGCAGATGTGGAAACCCAAAGTAACCCCTCCTGGCTTGAGAAGATACAAAAAACAGTTCGAAATGTCCTCAAAGCTGTTAATATATTCCAGGCTCCCGTGAACCAATCAGATGCTGCTAATGTGCGCAAGGAATATGAGGAGTCCAGTGCCAAGTTATCGAAAATTCAGTCAAGGATCTCAAGTTTATCACAAAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAATCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTACAAACAAGCTTCACAGGTTGAGGGGCATTCAACAACACGTTTGGGGCGCTGGGATAAATTTGAAGATTCATACAGGGTTATGATTTTTTCAAGTGGGGATAAGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTTAAGCTAAGATGTGGGGTTAAAAATGGCATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGTTTGTGTAGAGGAAAAGCTTCAGGCTAGAGGAAAGGTTTTCTTTTCTAAATCAAAAGGTGTAGTTCTTTTATGGGTCGCGGGAGTGAAACTTAAAACCTCATCCCCATTTTCGGACGTGGGATCTGGGAGACTATTCTTACCCGAATTACAAATTCCCGGTAGTCAATGTTTAAACACAAATTTTGCTATAGAAGAGTTTGGATAA 2043 40.19 MKQRAGFNSESLATLWVLCTSLALAPMVGSVSSPTHQFRGISPQDEMYYKSSDTIKCRDGSKKFSKAQLNDNFCDCPDGTDEPGTSACSNGKFYCRNAGHVPLLLFSSRVNDNICDCCDGSDEYDSKVKCPNTCWEAGKVARDKLKKRISTFEEGVKIRKQDVEHAKNAILKDEAELLELKNEEKVLKGLVEQLKERKEQIEKVEEEERLLKEKEAKEHLEREKDETRKIESTETTDVGESKTHEEDNWKKNEATKNYDKEYKQGEGNDDDKIGNWADSASDKQARMEEVDSELEAHLSNKPETEASLPKEDTAVEKDLLAKSETGESAGTKESSEEVLKKNDGSPELSKEELGRLVASRWTGENTEEQSRNKDSTNDSDEESHDISKEAYENDGYASETDDDNQRYDDDLEGDLEDTRDEFHDDSTSSERYYSDTELDSADVETQSNPSWLEKIQKTVRNVLKAVNIFQAPVNQSDAANVRKEYEESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFEIKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDKCWNGPDRSLKVKLRCGVKNGITDVDEPSRCEYVALLSTPAVCVEEKLQARGKVFFSKSKGVVLLWVAGVKLKTSSPFSDVGSGRLFLPELQIPGSQCLNTNFAIEEFG* 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56106 66751 - Chy5G090540.1 Chy05g00008 226235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00008 680 PANTHER BNACNNG14010D PROTEIN 28 620 - -
Chy05g00008 680 SUPERFAMILY Mannose 6-phosphate receptor domain 527 614 IPR009011 -
Chy05g00008 680 MobiDBLite consensus disorder prediction 216 354 - -
Chy05g00008 680 Coils Coil 163 230 - -
Chy05g00008 680 Gene3D - 516 615 IPR009011 -
Chy05g00008 680 MobiDBLite consensus disorder prediction 420 438 - -
Chy05g00008 680 Pfam Glucosidase II beta subunit-like protein 482 619 IPR036607 -
Chy05g00008 680 MobiDBLite consensus disorder prediction 366 402 - -
Chy05g00008 680 MobiDBLite consensus disorder prediction 216 447 - -
Chy05g00008 680 Pfam Glucosidase II beta subunit-like 31 170 IPR028146 -
Chy05g00008 680 MobiDBLite consensus disorder prediction 403 419 - -
Chy05g00008 680 Coils Coil 478 505 - -
Chy05g00008 680 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 28 620 IPR039794 -
Chy05g00008 680 ProSiteProfiles MRH domain profile. 521 616 IPR044865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00456 Chy-Chr1:3298493 Chy05g00008 Chy-Chr5:56106 3.95E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00008 K08288 - csv:101221877 1154.43