Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00027 ATGCCAACGAGTTACAGGCCTGAGCTTCTCACCGTCGCCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTGCTATTTCTACGTCGCCAAGAAATCCAAACCCAAAGGTTGCTTGGACCCTGATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAACTTAGCCATAATGTAGTGAAGTTCAGATTCTCTCTTCCGACTCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGCTGCAGAGGAAAAGATAGCCAAAGTGAAGATGTTGTGAAACCTTACACTCCAACCACTTTGGACATAGATGTTGGATACTTTGAGTTGGTCATTAAGATGTATCCACAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGACGATTCAAGTATGAACCTAATGAAGTAGAGGCCTTTGGAATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCAAGAGCAATACTAGAAAATGAAGTGGATAGCACCAACGTGCATCTTATCTATGCTAATGTTACTTATGAAGACATTCTTCTGAAGGAAGAATTGGATAGTCTTGCGACTACGTTCCCTACCCGTTTTTCTATCTACTATGTGCTCAATCAGCCTCCAGAAGAATGGGATGGTGGTGTTGGCTTTGTAACTGAGGAAATGATACGTCTACACTGTCCTGCGCCATCCCCTAATGTCCGGATTTTGAGGTGCGGACCACCCCCGATGAACAAAGCTATGGCTGCTTACCTGAACACTATTGGCTACACTTCTCGGATGCAGTTCCAGTTCTAA 837 46.12 MPTSYRPELLTVAVAVVAVGVATACYFYVAKKSKPKGCLDPDNFKEFKLVKRTQLSHNVVKFRFSLPTPTSILGLPIGQHMSCRGKDSQSEDVVKPYTPTTLDIDVGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYEPNEVEAFGMLAGGTGITPMFQVARAILENEVDSTNVHLIYANVTYEDILLKEELDSLATTFPTRFSIYYVLNQPPEEWDGGVGFVTEEMIRLHCPAPSPNVRILRCGPPPMNKAMAAYLNTIGYTSRMQFQF* 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 194281 197184 + Chy5G090730.1 Chy05g00027 226254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00027 278 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Chy05g00027 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
Chy05g00027 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Chy05g00027 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Chy05g00027 278 CDD cyt_b5_reduct_like 47 278 - -
Chy05g00027 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 3 278 IPR001834 GO:0016491
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
Chy05g00027 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Chy05g00027 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Chy05g00027 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Chy05g00027 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 272 IPR039261 -
Chy05g00027 278 Gene3D Translation factors 34 135 - -
Chy05g00027 278 SUPERFAMILY Riboflavin synthase domain-like 38 148 IPR017938 -
Chy05g00027 278 Gene3D - 136 278 IPR039261 -
Chy05g00027 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 3 278 - -
Chy05g00027 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00027 Chy-Chr5:194281 Chy08g00202 Chy-Chr8:4773222 2.11E-145 dispersed
Chy05g00027 Chy-Chr5:194281 Chy07g00682 Chy-Chr7:6605252 5.31E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00027 K00326 - csv:101219272 556.599