Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00037 ATGGCTGTAACAGCCCCAGGGCAGCTTAACGTGAACGAATCTCCTTCTTGGGGATCTAGAAGTGTCGACTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCTAGAGAATTGAAAACAGGTGAAATTGTTGCACTGAAGAAAATAAGAATGGATAATGAGAGGGAGGGGTTCCCTATTACTGCGATACGCGAAATCAAAATTTTAAAGAAGCTTCATCATGAAAATGTAATCAAGCTGAAAGAGATCGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGATGGTAACAAGTACAAAGGTGGAATCTACATGGTTTTTGAGTACATGGACCATGATTTGACTGGCCTGGCTGATCGTCCAGGGATGAGATTTTCAGTTCCTCAAATTAAGTGTTACATGAGGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTACTCCATAGAGATATAAAAGGGTCAAATCTGCTTATTGACAACGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCAAATGATCACAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAACTGCTGCTTGGGTCAACCAAATACGGTCCAGCTGTAGATATGTGGTCTGTTGGCTGTATCTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGGAAGGATGAGCCGGAGCAATTAAATAAGATTTTTGAGCTGTGTGGTGCTCCGGATGAAGTCAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAATAATTTCAAGCCCACGAGGCCAATGAAGAGACGTATTAGAGAAGTTTTCCGGCATTTTGATCGTCATGCTTTAGAACTGTTGGAGAAGATGCTTACACTTGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGATGCGGAGTATTTTTGGACAGATCCATTGCCTTGTGATCCTAAAAGTTTGCCTAAGTATGAATCATCACACGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACACCCACAGCATGCACGCCTTCCACCTATTCAGCAGTCTGGACAAGCACACGCACAAATGCGACCAGTACCTAACCAACCTATTCATGGGTCCCAACAACCAGTTGCTGCAGGGCCTAGCCATCATTTTGTAAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCTGGTGGAAATCCCCCTTCTGGATACAACCACTCAAGTCGTGGTGGTCAAGGTGGTTATGGTAACACACAATATGCTCAAGGACGAGGTGGTGCCTATGGGTCTGGTAGCATGTCTGGTGCTGGTCCTCGAGGAGGAGCTGGAGGTGGTGGTGGTTATGGCGTGGGGGCTCCAAATTACCCACAGAATGGTCCATATCCTGGTAGTTCTGGTACTGGTCGTGGCTCCAATGTGATGGGCGGAAACCGCAGCCAACAATATGGATGGCAGCAATAG 1542 46.04 MAVTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQAHAQMRPVPNQPIHGSQQPVAAGPSHHFVKPRGPPGPGRYPGGNPPSGYNHSSRGGQGGYGNTQYAQGRGGAYGSGSMSGAGPRGGAGGGGGYGVGAPNYPQNGPYPGSSGTGRGSNVMGGNRSQQYGWQQ* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 253177 258046 + Chy5G090830.1 Chy05g00037 226264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00037 513 MobiDBLite consensus disorder prediction 485 513 - -
Chy05g00037 513 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00037 513 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00037 513 PANTHER CELL DIVISION PROTEIN KINASE 5 447 - -
Chy05g00037 513 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 447 - -
Chy05g00037 513 MobiDBLite consensus disorder prediction 335 513 - -
Chy05g00037 513 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Chy05g00037 513 CDD STKc_CDK9_like 25 324 - -
Chy05g00037 513 MobiDBLite consensus disorder prediction 337 366 - -
Chy05g00037 513 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Chy05g00037 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Chy05g00037 513 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Chy05g00037 513 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00037 513 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Chy05g00037 513 MobiDBLite consensus disorder prediction 428 452 - -
Chy05g00037 513 MobiDBLite consensus disorder prediction 373 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01449 Chy-Chr4:21132250 Chy05g00037 Chy-Chr5:253177 0 dispersed
Chy05g00037 Chy-Chr5:253177 Chy09g00032 Chy-Chr9:301478 7.44E-121 dispersed
Chy05g00037 Chy-Chr5:253177 Chy12g01147 Chy-Chr12:16403329 1.06E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71250 PF00069 Pkinase 4.10E-75 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00037 K08819 - csv:101220936 992.645