Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00074 ATGGCGGCTTCTTCTAAAGTTATTGTTTCTTTGGTACTGTGTTTGATGATGGCTGTGTCTGTGAGATCTCAGCTTAGCTCCACCTTCTATGACACTACATGTCCTAACGTATCAAGCATTGTGCATGGTGTTATGCAGCAAGCTCTTCAAAGTGACGATAGAGCCGGTGCCAAAATCATCCGTCTCCATTTTCACGATTGTTTCGTCGACGGTTGTGATGGGTCGGTGCTACTCGAGGACCAAGATGGTATAACGAGCGAGTTGGGTGCACCTGGAAACGGAGGCATCACGGGTTTCAATATTGTTGATGACATCAAAACCGCAGTTGAGAATGTTTGTCCAGGAGTCGTTTCATGTGCTGACATTCTAGCCATTGGTTCTAGAGACGCAGTCACCTTGGCATCAGGACAGGGTTGGACTGTTCAATTGGGAAGAAGAGACAGTAGAACAGCAAATTTGCAAGGAGCCAGGGATAGGCTCCCAAGTCCTTTTGAGAGTCTCTCCAATATCCAAGGCATATTTAGAGACGTCGGTCTTAACGATAATTCCGATCTCGTTGCTCTATCAGGTGCACACACATTCGGCCGTTCAAGATGCATGTTTTTCAGCGGACGCCTAACCAATAATTCAAACGCAAATGACTCACCCATAGACTCGACATACGCGAGTCAGTTGAACCAAACTTGTCAATCAGGGTCAAACACATTCGTGAATCTGGACCCGACGACGCCAAACACATTCGACAGAAACTACTACACAAACCTTCAGAACAACCAAGGGCTTTTGAGAAGTGACCAAGTTCTGTTCTCCACTCCAGGAGCTTCAACTATCAGTACTGTCAACAGCTTCGCCAGCAGCGAGAGCGCATTTGCTGACGCCTTCGCTCAGTCAATGATTAGGATGGGAAATCTCGACCCTAAGACTGGGACCACCGGAGAAATCAGGACCAATTGTAGAAGACTCAATTAA 969 46.85 MAASSKVIVSLVLCLMMAVSVRSQLSSTFYDTTCPNVSSIVHGVMQQALQSDDRAGAKIIRLHFHDCFVDGCDGSVLLEDQDGITSELGAPGNGGITGFNIVDDIKTAVENVCPGVVSCADILAIGSRDAVTLASGQGWTVQLGRRDSRTANLQGARDRLPSPFESLSNIQGIFRDVGLNDNSDLVALSGAHTFGRSRCMFFSGRLTNNSNANDSPIDSTYASQLNQTCQSGSNTFVNLDPTTPNTFDRNYYTNLQNNQGLLRSDQVLFSTPGASTISTVNSFASSESAFADAFAQSMIRMGNLDPKTGTTGEIRTNCRRLN* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 531245 532721 - Chy5G091200.1 Chy05g00074 226301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00074 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Chy05g00074 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PANTHER PEROXIDASE 72-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 Gene3D - 29 322 - -
Chy05g00074 322 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Chy05g00074 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 Gene3D Peroxidase, domain 2 161 301 - -
Chy05g00074 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 SUPERFAMILY Heme-dependent peroxidases 24 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00074 322 PANTHER PEROXIDASE 58 13 322 - -
Chy05g00074 322 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
Chy05g00074 322 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00074 Chy-Chr5:531245 Chy09g01014 Chy-Chr9:12729051 2.60E-134 dispersed
Chy05g00074 Chy-Chr5:531245 Chy05g00076 Chy-Chr5:538787 1.58E-147 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00074 K00430 - csv:101212957 618.231