Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00076 ATGGCTTCCTTGCTCAGAGTTGCTTTCTTTTTGTTTCTGGGGTTGATGGTTAGAGCTTCTAAAGCTCAGCTCTGCCCCACGTTTTACGACGAATCATGCCCCGACGTATCCAACATTGTGCGCCGTGTGGTACAACAAGCTTTGGTCTCTGACGAACGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTCGTAAATGGGTGTGATGGGTCGGTTTTACTAGAGGACCAACCTGGTGTGGTGAGTGAGCTTGCCGCTCCTGGAAACGCCAATATTACAGGGTTTAACATTGTTAATAACATCAAAGCTGCCGTCGAAAAGGCTTGTCCTGGTGTTGTTTCATGTGCTGACATCTTAGCTATAGCTTCCGTGGAATCAGTTAATTTGGCAGGAGGACCGTGTTGGGAGGTACAACTAGGAAGAAGAGACAGTAGAAGGGCAAATTTACAAGGCGCAATAGATGGCCTTCCAAGTCCTTTCGAAAATGTTACACAACTTAAACGCAAGTTCGATAGAGTAAATCTTGATTCTACTGATCTTGTTGCCTTATCTGGTGCACACACATTTGGAAAATCAAGATGTCGATTTTTCGACCAACGTTTAAACGTTTCAAATCCAGATAACACGCTGAATCCCAGGTATGCACAACAGCTCCGTCAAGCTTGCAGTAGCGGCCGAGACACGTTTGTGAATCTGGACCCCACGACTCCCAACCATTTCGACAAGAACTACTACACAAACCTTCAGTCCAACACTGGCCTTCTCAGGAGTGACCAAGTCCTTCATTCCACTCCCGGCGAGAACACCGTCAAAATCGTCAACCTCTTCGCTGCCAGCCAGCAACAGTTCTTCGACAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCCAACCGTTAACTGGTAACCAAGGAGAAATTAGATCCAATTGCCGAAGGCTGAACTAA 957 46.92 MASLLRVAFFLFLGLMVRASKAQLCPTFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVESVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVNLDSTDLVALSGAHTFGKSRCRFFDQRLNVSNPDNTLNPRYAQQLRQACSSGRDTFVNLDPTTPNHFDKNYYTNLQSNTGLLRSDQVLHSTPGENTVKIVNLFAASQQQFFDSFGQSMINMGNIQPLTGNQGEIRSNCRRLN* 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 538787 540802 - Chy5G091220.1 Chy05g00076 226303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00076 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 Gene3D - 28 318 - -
Chy05g00076 318 Gene3D Peroxidase, domain 2 160 297 - -
Chy05g00076 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Chy05g00076 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 Pfam Peroxidase 40 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PANTHER PEROXIDASE 58 11 318 - -
Chy05g00076 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Chy05g00076 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 PANTHER PEROXIDASE 72-RELATED 11 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00076 318 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00076 Chy-Chr5:538787 Chy05g00080 Chy-Chr5:573216 4.38E-144 dispersed
Chy05g00074 Chy-Chr5:531245 Chy05g00076 Chy-Chr5:538787 1.58E-147 proximal
Chy05g00076 Chy-Chr5:538787 Chy05g00077 Chy-Chr5:546895 1.76E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00076 K00430 - csv:101212717 613.224