Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00077 ATGGCCTCCGCCTCCTCCGCCAACGCTGTCATCTCCTCCTTTTTCTTTCTAGCTCTTCTCATCGGCGGCTCTTTCGCTCAACTCTCCGAAACCTTTTACGATCAAACCTGCCCTCGTTTGGCCAACGTTGTCCGCGCCTCCGTCAAGAAAGCCATCGAAAGCGACATCCGTGCTGGTGCTAAACTTATTCGTCTCCATTTCCACGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGTCAGTGAGCTTAACTCACCTGGAAATCAAGGAATCCAAGGGCTTGAAATTGTCGACGCCATTAAAGCCGACGTCGAAAGAGAATGCCCTGGCATCGTCTCCTGTGCTGACATCCTAGCTCAGGCTTCTAAAGACTCTGTCGATGTGCAAGGAGGGCCTAGCTGGAGAGTGCTATACGGAAGACGAGACAGCAGAATAGCGAACAAAACAGGGGCGGACAGTAACTTGGCTAGTCCCTTCGAAACTCTAGATCAACTCAAAGCTAAATTTAAGAATGTTGGGCTCAATAGCATGGATCTCGTCGCTTTATCTGGGGCGCATACATTTGGACGATCGAGATGCAGATTCTTCAGTCACCGATTTGCGAATTTCAACAATACAGGAAGGCCAGACCAATCATTGAACTCAGACTACAGGAGATTTCTTGAAGGGGTTTGTTCAGCAGGAGCAGACACAAGAGCGAATTTCGATCCAGTAACACCGGATGTGTTTGACAAAAATTACTACACAAATCTTCAAGTGGGGAAGGGACTTTTGCAGAGCGATCAAGAGCTGTTCTCTACTCCTGGAGCTGACACCATCGCCATTGTTAACAGCTTTGCAGAAAGAGAAGGAACATTCTTCAAGGAGTTCAAACAGTCAATGATCAATATGGGAAATATAAAACCATTGACTGGTGGACAAGGGGAAATCAGAAGAAACTGCAGGAGGGTTAATTCAAACTCTGGCTTGTTGGGTGGAGAAGGAGAAGGATCAGAAGGCCACGATGTTATTCGTTTTAGGGTCAATAATGCAACAACGAGAAGACGATGGAAAAAGAAGGAAACGCATCCACTCTTCAACATTTTGCCACTTCCAACTTCAACCATGGCCTCTGCCGTTGCCTCCTTTTTCTTTCTTGCTCTTCTCTTCGGCACCTCTTTTGCTCAACTCTCCGAAACCTATTACGATCAAACCTGCCCTCGTCTCCCCAACATTGTCCGTGCCTCCGTCAAGAAAGCCATCCAATCCGACATACGTGCCGGTGCTAAACTCATTCGCCTCCATTTCCATGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGCTTGAGGATGCTCCTGGCATAGTCAGTGAGCTTAACTCACCTGGAAATCAAGGAATCCAAGGACTTGAAATTGTTGACGCCATTAAAGCGGATGTGGAAAAAGAATGCCCCGGCATCGTCTCCTGTGCTGACATCCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGCTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAATCGCCAACAAGACAGGGGCGGATAGTGGGTTAGCCAGTCCCTTCGAAACTCTAGATGAACTCAAAGCCAAATTTGCTGCTGTTGGGCTGGATACCACTGATCTCGTTGCTTTATCTGGGGCGCATACATTTGGACGATCGAGATGCGTATTCTTCAGCCACCGATTTGCGAATTTCAACGGAACTGGAAGCCCAGACCCATCACTGGACTCGAACTACAGGCAATTCCTTGAAGGGGTTTGTGCAGCAGGAGCAAACACAAGAGCCAATTTCGACCCGGTAACACCAGATGTGTTCGACAAAAATTACTACACAAATCTTCAAGTGGGGAAGGGACTTTTGCAGAGCGATCAAGAGCTGTTCTCTACTCCTGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCTGCCAGAGAAGGAACATTCTTCAAGGAGTTCCGGAAGTCAATGATCAATATGGGAAATATTAAACCTTTGACTGGAAAGCGTGGGGAAATTAGAAGAAACTGTAGAAGGGTTAATTCCAACTCGGGATTGTTCGGCGAAGAAGAAGAAGAAGAAGGCCATGATGTCATGTAA 2145 47.6 MASASSANAVISSFFFLALLIGGSFAQLSETFYDQTCPRLANVVRASVKKAIESDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSNLASPFETLDQLKAKFKNVGLNSMDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDQSLNSDYRRFLEGVCSAGADTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAEREGTFFKEFKQSMINMGNIKPLTGGQGEIRRNCRRVNSNSGLLGGEGEGSEGHDVIRFRVNNATTRRRWKKKETHPLFNILPLPTSTMASAVASFFFLALLFGTSFAQLSETYYDQTCPRLPNIVRASVKKAIQSDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVEKECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDELKAKFAAVGLDTTDLVALSGAHTFGRSRCVFFSHRFANFNGTGSPDPSLDSNYRQFLEGVCAAGANTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRKSMINMGNIKPLTGKRGEIRRNCRRVNSNSGLFGEEEEEEGHDVM* 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 546895 551539 - Chy5G091230.1 Chy05g00077 226304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00077 714 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Chy05g00077 714 Pfam Peroxidase 414 659 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 ProSitePatterns Peroxidases proximal heme-ligand signature. 556 566 IPR019793 -
Chy05g00077 714 Gene3D - 32 326 - -
Chy05g00077 714 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 SUPERFAMILY Heme-dependent peroxidases 27 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 508 523 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 612 627 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 407 426 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 555 567 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 431 451 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 670 683 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 470 483 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 489 499 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Plant peroxidase signature 628 645 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 ProSiteProfiles Plant heme peroxidase family profile. 397 696 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 Gene3D Peroxidase, domain 2 164 305 - -
Chy05g00077 714 Gene3D Peroxidase, domain 2 534 675 - -
Chy05g00077 714 Gene3D - 402 696 - -
Chy05g00077 714 ProSiteProfiles Plant heme peroxidase family profile. 27 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PANTHER PEROXIDASE 72-RELATED 386 696 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 SUPERFAMILY Heme-dependent peroxidases 397 696 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00077 714 CDD secretory_peroxidase 397 695 IPR033905 GO:0004601|GO:0042744
Chy05g00077 714 CDD secretory_peroxidase 27 325 IPR033905 GO:0004601|GO:0042744
Chy05g00077 714 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Chy05g00077 714 PANTHER PEROXIDASE 58 16 326 - -
Chy05g00077 714 PANTHER PEROXIDASE 58 386 696 - -
Chy05g00077 714 ProSitePatterns Peroxidases active site signature. 429 440 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00077 Chy-Chr5:546895 Chy05g00079 Chy-Chr5:563749 3.97E-126 dispersed
Chy05g00076 Chy-Chr5:538787 Chy05g00077 Chy-Chr5:546895 1.76E-133 tandem
Chy05g00077 Chy-Chr5:546895 Chy05g00078 Chy-Chr5:559351 1.90E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00077 K00430 - csv:101217543 653.284