Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00078 ATGAAAGCGACGAATGCTTCATTTGTGGTTGTTTCATCACCAAACAAGATGGGTTCTTTCACTTTCTTCCTTTCGTTTGTCTGTATTTTGTTTGTAACCTCTTATGCCCAACTCACTGAGAATTTCTACGACCAAACTTGCCCTCGTTTACCTAACATTGTCCGCCGTGAAGTCAAAAGAGCTATCGAAACTGATATTCGTGCTGGTGCTAAACTCATTCGCTTCCATTTCCACGATTGTTTCGTCCAAGGGTGCGATGGGTCTGTTTTGCTAGAGGATCCTCCTGGCTTCGAGACCGAGCTCAACGGACTTGGAAACTTAGGAATCCAAGGACTCGAGATTATCGACGCTATCAAAGCTGCCGTCGAGAGAGAATGCCCCGGCGTTGTCTCCTGTGCCGACATCCTAGCTCAAGCCTCTAAAGACTCTGTCGACGTGCAAGGAGGACCCAGTTGGAGAGTTCTATACGGAAGAAGAGATAGCAGAACAGCCAATAAAACAGGGGCCGATAACCTCCCAAGCCCCTTCGAAAATCTTGAACCACTCGTAAAAAAATTCGAAGACGTTGGGTTAAATGAAACCGACCTTGTTGCTCTATCAGGGGCACATACGTTTGGTCGGTCCAGATGCATGTTCTTCGATAGTCGTTTGTCCAACTTCAGTGGCAGTGGGCAACCAGATCCAACGCTGGATCCAACTTACAGGCAAAAACTTCAAAGCGCTTGTACAAGCCTAGAAACACGAGTGAATTTCGATCCAACAACACCGGATAAATTCGATAAGAATTACTTTACCAATCTTCGAGCCAATAAAGGGCTGTTACAGAGTGACCAAGTTCTGCATTCAACACCAGGGGCTAAAACAGTTGAACTTGTTAGACTTATGGCGTTGAAAGAAGAAACTTTCTTTAGACAATTTCGGTTGTCGATGATTAAGATGGGGAACATCAAACCATTAACTGGAAGCCAAGGGGAAATTAGAAGAAACTGCAGGAGGGTTAATGACTTGGGAAGTGAAACAGGGCATGATGTTATGTAA 1038 44.99 MKATNASFVVVSSPNKMGSFTFFLSFVCILFVTSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDPPGFETELNGLGNLGIQGLEIIDAIKAAVERECPGVVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANKTGADNLPSPFENLEPLVKKFEDVGLNETDLVALSGAHTFGRSRCMFFDSRLSNFSGSGQPDPTLDPTYRQKLQSACTSLETRVNFDPTTPDKFDKNYFTNLRANKGLLQSDQVLHSTPGAKTVELVRLMALKEETFFRQFRLSMIKMGNIKPLTGSQGEIRRNCRRVNDLGSETGHDVM* 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 559351 563361 - Chy5G091240.1 Chy05g00078 226305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00078 345 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 Pfam Peroxidase 54 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 Gene3D - 42 334 - -
Chy05g00078 345 PANTHER PEROXIDASE 58 28 334 - -
Chy05g00078 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Chy05g00078 345 Gene3D Peroxidase, domain 2 173 313 - -
Chy05g00078 345 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 CDD secretory_peroxidase 37 333 IPR033905 GO:0004601|GO:0042744
Chy05g00078 345 SUPERFAMILY Heme-dependent peroxidases 37 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 ProSiteProfiles Plant heme peroxidase family profile. 37 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00078 345 PANTHER PEROXIDASE 72-RELATED 28 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00078 Chy-Chr5:559351 Chy05g00080 Chy-Chr5:573216 1.12E-139 dispersed
Chy05g00077 Chy-Chr5:546895 Chy05g00078 Chy-Chr5:559351 1.90E-162 tandem
Chy05g00078 Chy-Chr5:559351 Chy05g00079 Chy-Chr5:563749 7.12E-39 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00078 K00430 - csv:101212230 549.28