Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00079 ATGGATCTTGTGACCCTATTGGGATCGCACACGTTCGGTCAATCAAGATGTTTGTTCTTCACAGGACGGTTCAACAATTTCAACAACACTGGTCTACCCGACCCAACAATGGACCCTGGATACATGGTGCAGCTACGTCAAGTTTGTGCCACTCCAGAAACAAGAGTAGACTTAGATCTAACCACACCAGTGGCATTCGATAAAAACTACTACGTTAATCTCCTAAACCGTAGAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACCCCTGATTCCGATACAACTGCCATTGTCCGCGCATTTGCTGCTAGTCAGCTTCGGTTCTTTACTGAATTTGGGAATTCCATGATCAAAATGGGGAATCTTAGCCCTCCATCTGACACCCCATCTGAATTTCTCTTATCTCTTTCTCTTCTTTACAACCTTAACCCAACAAGTTTAGCTTTAGGCATCAAGAAGATGGAAGATATGTTTGCACAAAATTTCTTATCCCCGAAGCAAAGACCAAAGAAGACTCCATTTACAGTATCAAAAATGGGTTTACCTAAAATGGCAGCCATTGTTGTGGTGGTGGCTTTGATGCTATCACCCTCTCAAGCCCAGCTTTCACCTTTCTTCTACGCCACCACATGCCCTCAGCTGCCTTTCGTTGTTCTCAACGTGGTTGCCCAAGCCCTACAGACTGATGACCGAGCTGCTGCTAAGCTCATTCGCCTCCATTTTCATGATTGCTTTGTCAATGGGTGTGATGGATCGATTCTATTGGTAGACGTACCGGGCGTTATCGATAGTGAACTTAATGGACCTCCAAATGGTGGAATCCAAGGAATGGACATTGTGGACAACATCAAAGCAGCAGTTGAGAGTGCTTGTCCAGGAGTTGTTTCTTGCGCTGATATCTTAGCCATTTCATCTCAAATCTCTGTTTTCTTGTCGGGAGGACCAATTTGGGTTGTACCAATGGGAAGAAAAGACAGCAGAATAGCCAATAGAACTGGAACCTCAAACTTACCTGGTCCCTCAGAAACTCTAGAGGGACTTAAAGGCAAGTTTGGAGATCAAGGGCTTGATTCTACAGATCTCGTGGCTCTATCAGGAGCCCACACGTTCGGAAAATCAAGATGCATGTTCTTCAGTGGCCGCCTCACCAACTTCAACGGCACAGGAAGACCCGACACAACGCTTGACCCAATATACAGGGAGCAGCTTCGAAGACTTTGTACTACTCAACAAACACGAGTAAATTTCGACCCAGTCACACCCACTAGATTTGACAAGACCTATTACAACAATTTGATTAGCTTAAGAGGGCTTCTCCAAAGCGACCAAGAGCTCTTCTCAACTCCCAGAGCTGATACCATAGCCGTTGTCAGGACTTTTGCTGCCAACGAACGTGCCTTCTTTAAACAATTTGTGAAATCAATGATCAAAATGGGCAACCTCAAGCCTCCCCCTGGCATTGCATCAGAAGTTAGATTGGACTGTAAGAGGGTCAACCCAGTCAGAGCCTACGACGTTATGTAA 1527 45.38 MDLVTLLGSHTFGQSRCLFFTGRFNNFNNTGLPDPTMDPGYMVQLRQVCATPETRVDLDLTTPVAFDKNYYVNLLNRRGLLQSDQELFSTPDSDTTAIVRAFAASQLRFFTEFGNSMIKMGNLSPPSDTPSEFLLSLSLLYNLNPTSLALGIKKMEDMFAQNFLSPKQRPKKTPFTVSKMGLPKMAAIVVVVALMLSPSQAQLSPFFYATTCPQLPFVVLNVVAQALQTDDRAAAKLIRLHFHDCFVNGCDGSILLVDVPGVIDSELNGPPNGGIQGMDIVDNIKAAVESACPGVVSCADILAISSQISVFLSGGPIWVVPMGRKDSRIANRTGTSNLPGPSETLEGLKGKFGDQGLDSTDLVALSGAHTFGKSRCMFFSGRLTNFNGTGRPDTTLDPIYREQLRRLCTTQQTRVNFDPVTPTRFDKTYYNNLISLRGLLQSDQELFSTPRADTIAVVRTFAANERAFFKQFVKSMIKMGNLKPPPGIASEVRLDCKRVNPVRAYDVM* 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 563749 567910 - Chy5G091250.1 Chy05g00079 226306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00079 508 Gene3D - 207 500 - -
Chy05g00079 508 Gene3D Peroxidase, domain 2 1 120 - -
Chy05g00079 508 PRINTS Plant peroxidase signature 212 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 295 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 432 449 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 474 487 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 236 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 314 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 360 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Plant peroxidase signature 416 431 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 CDD secretory_peroxidase 202 499 IPR033905 GO:0004601|GO:0042744
Chy05g00079 508 ProSitePatterns Peroxidases active site signature. 234 245 IPR019794 GO:0004601
Chy05g00079 508 ProSitePatterns Peroxidases proximal heme-ligand signature. 361 371 IPR019793 -
Chy05g00079 508 Pfam Peroxidase 2 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 Pfam Peroxidase 221 463 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 SUPERFAMILY Heme-dependent peroxidases 202 501 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PANTHER PEROXIDASE 58 1 132 - -
Chy05g00079 508 PANTHER PEROXIDASE 58 191 500 - -
Chy05g00079 508 ProSiteProfiles Plant heme peroxidase family profile. 1 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 Gene3D Peroxidase, domain 2 339 479 - -
Chy05g00079 508 PRINTS Haem peroxidase superfamily signature 314 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Haem peroxidase superfamily signature 361 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Haem peroxidase superfamily signature 234 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Haem peroxidase superfamily signature 296 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PRINTS Haem peroxidase superfamily signature 418 433 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 ProSiteProfiles Plant heme peroxidase family profile. 202 500 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PANTHER PEROXIDASE 72-RELATED 1 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 PANTHER PEROXIDASE 72-RELATED 191 500 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00079 508 SUPERFAMILY Heme-dependent peroxidases 2 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00077 Chy-Chr5:546895 Chy05g00079 Chy-Chr5:563749 3.97E-126 dispersed
Chy05g00079 Chy-Chr5:563749 Chy05g00081 Chy-Chr5:579739 5.39E-40 dispersed
Chy05g00078 Chy-Chr5:559351 Chy05g00079 Chy-Chr5:563749 7.12E-39 tandem
Chy05g00079 Chy-Chr5:563749 Chy05g00080 Chy-Chr5:573216 2.90E-39 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00079 K00430 - csv:101211989 639.417