Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g00079 | ATGGATCTTGTGACCCTATTGGGATCGCACACGTTCGGTCAATCAAGATGTTTGTTCTTCACAGGACGGTTCAACAATTTCAACAACACTGGTCTACCCGACCCAACAATGGACCCTGGATACATGGTGCAGCTACGTCAAGTTTGTGCCACTCCAGAAACAAGAGTAGACTTAGATCTAACCACACCAGTGGCATTCGATAAAAACTACTACGTTAATCTCCTAAACCGTAGAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACCCCTGATTCCGATACAACTGCCATTGTCCGCGCATTTGCTGCTAGTCAGCTTCGGTTCTTTACTGAATTTGGGAATTCCATGATCAAAATGGGGAATCTTAGCCCTCCATCTGACACCCCATCTGAATTTCTCTTATCTCTTTCTCTTCTTTACAACCTTAACCCAACAAGTTTAGCTTTAGGCATCAAGAAGATGGAAGATATGTTTGCACAAAATTTCTTATCCCCGAAGCAAAGACCAAAGAAGACTCCATTTACAGTATCAAAAATGGGTTTACCTAAAATGGCAGCCATTGTTGTGGTGGTGGCTTTGATGCTATCACCCTCTCAAGCCCAGCTTTCACCTTTCTTCTACGCCACCACATGCCCTCAGCTGCCTTTCGTTGTTCTCAACGTGGTTGCCCAAGCCCTACAGACTGATGACCGAGCTGCTGCTAAGCTCATTCGCCTCCATTTTCATGATTGCTTTGTCAATGGGTGTGATGGATCGATTCTATTGGTAGACGTACCGGGCGTTATCGATAGTGAACTTAATGGACCTCCAAATGGTGGAATCCAAGGAATGGACATTGTGGACAACATCAAAGCAGCAGTTGAGAGTGCTTGTCCAGGAGTTGTTTCTTGCGCTGATATCTTAGCCATTTCATCTCAAATCTCTGTTTTCTTGTCGGGAGGACCAATTTGGGTTGTACCAATGGGAAGAAAAGACAGCAGAATAGCCAATAGAACTGGAACCTCAAACTTACCTGGTCCCTCAGAAACTCTAGAGGGACTTAAAGGCAAGTTTGGAGATCAAGGGCTTGATTCTACAGATCTCGTGGCTCTATCAGGAGCCCACACGTTCGGAAAATCAAGATGCATGTTCTTCAGTGGCCGCCTCACCAACTTCAACGGCACAGGAAGACCCGACACAACGCTTGACCCAATATACAGGGAGCAGCTTCGAAGACTTTGTACTACTCAACAAACACGAGTAAATTTCGACCCAGTCACACCCACTAGATTTGACAAGACCTATTACAACAATTTGATTAGCTTAAGAGGGCTTCTCCAAAGCGACCAAGAGCTCTTCTCAACTCCCAGAGCTGATACCATAGCCGTTGTCAGGACTTTTGCTGCCAACGAACGTGCCTTCTTTAAACAATTTGTGAAATCAATGATCAAAATGGGCAACCTCAAGCCTCCCCCTGGCATTGCATCAGAAGTTAGATTGGACTGTAAGAGGGTCAACCCAGTCAGAGCCTACGACGTTATGTAA | 1527 | 45.38 | MDLVTLLGSHTFGQSRCLFFTGRFNNFNNTGLPDPTMDPGYMVQLRQVCATPETRVDLDLTTPVAFDKNYYVNLLNRRGLLQSDQELFSTPDSDTTAIVRAFAASQLRFFTEFGNSMIKMGNLSPPSDTPSEFLLSLSLLYNLNPTSLALGIKKMEDMFAQNFLSPKQRPKKTPFTVSKMGLPKMAAIVVVVALMLSPSQAQLSPFFYATTCPQLPFVVLNVVAQALQTDDRAAAKLIRLHFHDCFVNGCDGSILLVDVPGVIDSELNGPPNGGIQGMDIVDNIKAAVESACPGVVSCADILAISSQISVFLSGGPIWVVPMGRKDSRIANRTGTSNLPGPSETLEGLKGKFGDQGLDSTDLVALSGAHTFGKSRCMFFSGRLTNFNGTGRPDTTLDPIYREQLRRLCTTQQTRVNFDPVTPTRFDKTYYNNLISLRGLLQSDQELFSTPRADTIAVVRTFAANERAFFKQFVKSMIKMGNLKPPPGIASEVRLDCKRVNPVRAYDVM* | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 563749 | 567910 | - | Chy5G091250.1 | Chy05g00079 | 226306 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g00079 | 508 | Gene3D | - | 207 | 500 | - | - | |
Chy05g00079 | 508 | Gene3D | Peroxidase, domain 2 | 1 | 120 | - | - | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 212 | 231 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 276 | 289 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 295 | 305 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 432 | 449 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 474 | 487 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 236 | 256 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 314 | 329 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 360 | 372 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Plant peroxidase signature | 416 | 431 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | CDD | secretory_peroxidase | 202 | 499 | IPR033905 | GO:0004601|GO:0042744 | |
Chy05g00079 | 508 | ProSitePatterns | Peroxidases active site signature. | 234 | 245 | IPR019794 | GO:0004601 | |
Chy05g00079 | 508 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 361 | 371 | IPR019793 | - | |
Chy05g00079 | 508 | Pfam | Peroxidase | 2 | 105 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | Pfam | Peroxidase | 221 | 463 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | SUPERFAMILY | Heme-dependent peroxidases | 202 | 501 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PANTHER | PEROXIDASE 58 | 1 | 132 | - | - | |
Chy05g00079 | 508 | PANTHER | PEROXIDASE 58 | 191 | 500 | - | - | |
Chy05g00079 | 508 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | Gene3D | Peroxidase, domain 2 | 339 | 479 | - | - | |
Chy05g00079 | 508 | PRINTS | Haem peroxidase superfamily signature | 314 | 326 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Haem peroxidase superfamily signature | 361 | 376 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Haem peroxidase superfamily signature | 234 | 248 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Haem peroxidase superfamily signature | 296 | 313 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PRINTS | Haem peroxidase superfamily signature | 418 | 433 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | ProSiteProfiles | Plant heme peroxidase family profile. | 202 | 500 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PANTHER | PEROXIDASE 72-RELATED | 1 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | PANTHER | PEROXIDASE 72-RELATED | 191 | 500 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Chy05g00079 | 508 | SUPERFAMILY | Heme-dependent peroxidases | 2 | 136 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g00077 | Chy-Chr5:546895 | Chy05g00079 | Chy-Chr5:563749 | 3.97E-126 | dispersed | |
Chy05g00079 | Chy-Chr5:563749 | Chy05g00081 | Chy-Chr5:579739 | 5.39E-40 | dispersed | |
Chy05g00078 | Chy-Chr5:559351 | Chy05g00079 | Chy-Chr5:563749 | 7.12E-39 | tandem | |
Chy05g00079 | Chy-Chr5:563749 | Chy05g00080 | Chy-Chr5:573216 | 2.90E-39 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g00079 | K00430 | - | csv:101211989 | 639.417 |