Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00080 ATGATAAAAATGGCTTCTTTTAACTCTCCACTGTTCTTCCCATTGTTTTGCTTATTGGGTTTCCTGGTGGGAAACTCTTTGGCTCAACTAAACCCTTCATTTTACGCCAAAACATGTCCTAATTTACCTAATATTGTGAATGCTGTCGTTGCTAAGGCTCTGCAAACCGATGCTCGAGCTGGAGCCAAGCTTATTCGTCTCCATTTTCATGACTGCTTTGTTGACGGGTGTGATGCGTCTGTTTTGCTAGAGAATGCACCAGGCATAGACAGTGAACTAGATGCCCCTGGAAATCAAGGCATTCAAGGTCTTAACATTGTCGATGACATCAAATCCGCTGTCGAAAAGGCTTGCCCTCGCACTGTCTCTTGTGCTGACATCTTAGCCATTGCCTCCAAAGAATCCGTCGTATTGGCTGGAGGGCCGAGCTGGGTTGTGCCATTTGGACGAAGAGACAGCAGAACAGCCAATAAGGAAGGAGCCACAAACAACCTCGCCAGTCCCTTTGAAGATCTCAATGCACTCAAAGCCAAATTTGGTGTTTTCGGTCTCAATTCCACTGATCTCGTGGCTTTGTCTGGAGCACATACATTTGGGCGTTCAAGGTGCGCATTTTTCAGCCAAAGATTCGCCACGCCAGACCCAACGCTGGACCCAGCCTACAGAGAGCAGCTCAAAAGAATTTGCTCAAGTGGGTCAGAGACAAGAGCCAATTTTGATCCGACGACTCCAGACACATTTGACAAAAACTATTACACGAACCTTCAAGGGCTAAGAGGACTTTTGCAGAGTGATCAAGTACTGTTCTCAACTAGTGGGGCTGACACGGTGGGGATTGTGAACCGGTTTGCCAAAAAGCAAGGCGAGTTTTTCAAAAGTTTTGGTCAGTCTATGATCAAAATGGGAAATATTACTCCTTTAACTGGAAACAAAGGAGAGATTAGATTGAATTGTAGGAGGGTTAATCCAAGAAGGCCTAGAAGTACTGATGAAGGTCGTGATTTTATGTAA 1011 45.3 MIKMASFNSPLFFPLFCLLGFLVGNSLAQLNPSFYAKTCPNLPNIVNAVVAKALQTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIDSELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILAIASKESVVLAGGPSWVVPFGRRDSRTANKEGATNNLASPFEDLNALKAKFGVFGLNSTDLVALSGAHTFGRSRCAFFSQRFATPDPTLDPAYREQLKRICSSGSETRANFDPTTPDTFDKNYYTNLQGLRGLLQSDQVLFSTSGADTVGIVNRFAKKQGEFFKSFGQSMIKMGNITPLTGNKGEIRLNCRRVNPRRPRSTDEGRDFM* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 573216 574481 - Chy5G091260.1 Chy05g00080 226307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00080 336 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Chy05g00080 336 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Chy05g00080 336 ProSiteProfiles Plant heme peroxidase family profile. 29 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 Pfam Peroxidase 46 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 Gene3D Peroxidase, domain 2 166 301 - -
Chy05g00080 336 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PANTHER PEROXIDASE 58 21 322 - -
Chy05g00080 336 Gene3D - 34 322 - -
Chy05g00080 336 SUPERFAMILY Heme-dependent peroxidases 29 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00080 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Chy05g00080 336 PANTHER PEROXIDASE 72-RELATED 21 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00076 Chy-Chr5:538787 Chy05g00080 Chy-Chr5:573216 4.38E-144 dispersed
Chy05g00078 Chy-Chr5:559351 Chy05g00080 Chy-Chr5:573216 1.12E-139 dispersed
Chy05g00080 Chy-Chr5:573216 Chy09g01014 Chy-Chr9:12729051 1.75E-135 dispersed
Chy05g00079 Chy-Chr5:563749 Chy05g00080 Chy-Chr5:573216 2.90E-39 tandem
Chy05g00080 Chy-Chr5:573216 Chy05g00081 Chy-Chr5:579739 8.54E-141 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00080 K00430 - csv:101211507 647.891