Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00081 ATGTCGTTCACTAAAGTTGCAGCTTTAGCAGCCTTGTTGTGTATGATGTTGAGGGGCTCTTTTGCCCAACTCAGCCCTACCTTCTACGACCAGTCTTGCCCTAATCTTACCGCTGTCGTCAGAGATACTGTAAGCCAGGCATTGCAGAGTGATGTTCGAGCCGGGGCCAAGCTTGTTCGCTTTCACTTCCATGATTGTTTTGTCAACGGTTGTGATGGGTCAGTTTTGTTGGAAAATCAAGATGGTGTAGAGAGTGAATTAGATGCTCCAGGAAACCAAGGAATACAAGGCTTTGACATTGTCGACAGCATCAAAACTGCAGTTGAAGCTTCTTGTCCAAACACTGTGTCTTGTGCAGATATCTTAGCCATTTCAGCCCGTGAATCTGTTGTCTTGACAGGAGGGTCAGGTTGGGTAGTCCAATTAGGAAGAAGAGATAGCCAAAATGCAAATAGAACTGGAGCTGAAAACAACCTCCCAAGCCCTTTTGAAACACTCGATCAACTTCGAGCAAAATTTAATGCAGCTGGGCTCGATTCTACCGATCTTGTCACTTTATCTGGAGCGCATACATTTGGAAGGTCAAGATGCATATTCTTCAGTGGGAGGCTAAACAACTTCAATGGCACCGGAAGTCCAGACTCGACTCTTGACCCTACATTTCGGGATGCATTGGTCATTGCTTGTCCTACCGGTGACGGAAACAACCGCATCGCACTCGACGTGGCGACACCGGATGCCTTCGATAATGCATATTACACTGATTTGGTTACCAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCGGAAAACATCGAGATCGTCAACCGTTTTGCCAGCAACCAATCTGATTTCTTCGCTCAGTTTGGTCAGTCAATGATAAATATGGGGAACATTCAACCGTTACTGGCACCGGCGGGAGAAATCAGGACCAATTGTAGGCGTGTTAATCCTACTACTGCTGCTGGTACTGCTGTTATGTAA 1002 46.81 MSFTKVAALAALLCMMLRGSFAQLSPTFYDQSCPNLTAVVRDTVSQALQSDVRAGAKLVRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNQGIQGFDIVDSIKTAVEASCPNTVSCADILAISARESVVLTGGSGWVVQLGRRDSQNANRTGAENNLPSPFETLDQLRAKFNAAGLDSTDLVTLSGAHTFGRSRCIFFSGRLNNFNGTGSPDSTLDPTFRDALVIACPTGDGNNRIALDVATPDAFDNAYYTDLVTNRGLLQSDQELFSTEGAENIEIVNRFASNQSDFFAQFGQSMINMGNIQPLLAPAGEIRTNCRRVNPTTAAGTAVM* 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 579739 581035 - Chy5G091270.1 Chy05g00081 226308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00081 333 Gene3D Peroxidase, domain 2 160 302 - -
Chy05g00081 333 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Chy05g00081 333 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Chy05g00081 333 PANTHER PEROXIDASE 58 13 323 - -
Chy05g00081 333 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 Pfam Peroxidase 40 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 Gene3D - 28 323 - -
Chy05g00081 333 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00081 333 PANTHER PEROXIDASE 72-RELATED 13 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00079 Chy-Chr5:563749 Chy05g00081 Chy-Chr5:579739 5.39E-40 dispersed
Chy05g00081 Chy-Chr5:579739 Chy09g01014 Chy-Chr9:12729051 7.66E-144 dispersed
Chy05g00080 Chy-Chr5:573216 Chy05g00081 Chy-Chr5:579739 8.54E-141 tandem
Chy05g00081 Chy-Chr5:579739 Chy05g00082 Chy-Chr5:583836 1.21E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00081 K00430 - csv:101217743 648.277