Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00082 ATGATTTGTGGTTCCACTAGTTCTCAATTAACTGTAGATTTCTACAGAAGATCGTGTCCAAATGTTCTCAGAATCGTGAGGAGAGAAGTCATCAATGCTCTCAAGAACGATATGCGAATGGCTGCTTCCCTTCTTCGCCTCCACTTTCACGACTGCTTTGTTAGCGGTTGCGACGCGTCTGTGCTGTTAGATGGGAGTGATGGGGAGCAAAATGCACTTCCCAACATCAATTCTCTGAGAGGGCTTGAAGTTATGGATAACATCAAAGCAGTAGTGGAGAATTCATGTCCGGGAGTTGTATCTTGTGCTGATATATTAACCATAGCTGCCAGAGATTCTGTTCTCTTGAGTGGAGGACCGGCATGGAAAGTGTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAGAACAGGAGCCGAGGAACTTCCTTCTCCATTTGAAAGCCTTGATGGTATCATCGAGAAATTCGCTGATGTTGGGCTCGATATGACTGACGTCGTGGCTTTATCTGGAGCTCATACATTTGGATTTGCAAGATGTGCGATGTTCAACAGTAGGCTGTTCAACTTCTCAGGAAGTGATTCTCCAGACCCAACCATGGAGTCTACAATGGTATCTGATCTTCAAGCTCTTTGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACCGAAACTCAACCGATTTATTCGACAACCATTACTACAAGAACTTGCTGAACCAAAAGGGGCTGTTGGGGTCCGACCAAATCCTGTTCTCAAGCAATGAAGCTCAAACCACTACAAAACCGTTGGTCCAAGCTTATAGCTCAAACACTACGCTTTTCTTCAACGACTTTGTTAAAGCCATGATCAAGATGGGGAATATGAGCCCACTCACTGGCTCCAATGGGCAGATTCGAAACAACTGTGGAATCGTTAATTCCTCTTAG 936 45.51 MICGSTSSQLTVDFYRRSCPNVLRIVRREVINALKNDMRMAASLLRLHFHDCFVSGCDASVLLDGSDGEQNALPNINSLRGLEVMDNIKAVVENSCPGVVSCADILTIAARDSVLLSGGPAWKVLLGRRDGLVANRTGAEELPSPFESLDGIIEKFADVGLDMTDVVALSGAHTFGFARCAMFNSRLFNFSGSDSPDPTMESTMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYYKNLLNQKGLLGSDQILFSSNEAQTTTKPLVQAYSSNTTLFFNDFVKAMIKMGNMSPLTGSNGQIRNNCGIVNSS* 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 583836 585651 - Chy5G091280.1 Chy05g00082 226309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00082 311 Gene3D Peroxidase, domain 2 143 291 - -
Chy05g00082 311 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Haem peroxidase superfamily signature 41 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 Gene3D - 15 309 - -
Chy05g00082 311 ProSiteProfiles Plant heme peroxidase family profile. 9 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 ProSitePatterns Peroxidases active site signature. 41 52 IPR019794 GO:0004601
Chy05g00082 311 PANTHER PEROXIDASE 59 7 308 - -
Chy05g00082 311 CDD secretory_peroxidase 9 308 IPR033905 GO:0004601|GO:0042744
Chy05g00082 311 PANTHER PEROXIDASE 72-RELATED 7 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
Chy05g00082 311 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 43 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 239 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 223 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 PRINTS Plant peroxidase signature 19 38 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 SUPERFAMILY Heme-dependent peroxidases 9 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy05g00082 311 Pfam Peroxidase 26 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02002 Chy-Chr2:23899758 Chy05g00082 Chy-Chr5:583836 2.15E-94 dispersed
Chy05g00082 Chy-Chr5:583836 Chy07g01260 Chy-Chr7:17305002 2.26E-102 dispersed
Chy09g01014 Chy-Chr9:12729051 Chy05g00082 Chy-Chr5:583836 2.69E-95 dispersed
Chy05g00081 Chy-Chr5:579739 Chy05g00082 Chy-Chr5:583836 1.21E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00082 K00430 - csv:101211257 600.127