Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00118 ATGGATTCGTCTCACCCATCGTCGTCCCCACCGGAGCTTGATCTTCACACTCTCAAACCCATCAAGGTACTTGGAAAGGGAGCCATGGGGACTGTATTTCTCGTCCACGATCGAATTTCTGATGAGTCTGCTCATTTCCCCTTTGCTCTTAAGGTCGTTGAGAAATCCTCTTTTGCTTCCAAAGTCGACGCCGAGAGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCTTTCCCTAAACCACCTCACCCTTTTCTTCCCGACATTGTTGGTTCTTTCGAATCCGATGAGTTTTTGGGTTGGGCTGTTCCGTACTGTCCCGGGGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGGGTTTTCTCTCCGGCTGTCATTCGTTTTTATTTGGCGGAGATCGTTTGTGCGCTCGACCACCTTCATAGTATGGGGATCGTCTACCGAGATTTGAAGCCGGAGAATGTGTTGATTCAACAATCAGGTCACGTCACTCTCACCGACTTTGATCTGTCGCGTACTTTAACACGTAGAACAGTAAAAGACGTTGTCTCTCTTGAAAACACCGGTCACGAGAAGCCGCCGATCGCCGTCAGACGAAAACCGGGGAGAAACTTGACACGGTGGATCATGGCAACATCCAACGTTAAAAACGGCTTAAAAAAGGCTAAATCCGCTCGGGTTAGTCCGGTGAGTCGTCGGAAGTCGAGTTTCACCAATGGCGAACGGTCGAATTCATTCGTCGGAACGGAGGAGTATGTCTCACCGGAAGTTGTTAAAGGAGACGGACATGAATTCGCCGTTGATTGGTGGGCTCTAGGGATCCTCACGTACGAGATGCTCTACGGGACAACACCGTTCAAGGGGAAGAACCGGAAAGAGACGTTTCGAAACGTTTTGGTCAAATCTCCGGAGCTGATCGGAAAGCGATCGGATTTAACGGATTTGATCGAAAGGTTGCTCGTGAAGGACCCCACGAAGCGGTTGGGGTACGGACGAGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGTGTTAAGTGGGACCTGTTAACGGAAGTAACGCGACCGCCATTTTTACCTCAACGTGAAGAAACGGAATGGACGGGGAATGTACGGCTGGGTTGTGTGAGTATAACGGAATACTTTCATAAAGAGAGATCGCCGCCTTCGTTTCCAGCGTCGCCGTCGGCAACAACACCGTCGACGTCATTCAGTTGGGAGAATAATAAGATGTCATTGACAGAGTTCTAA 1266 49.92 MDSSHPSSSPPELDLHTLKPIKVLGKGAMGTVFLVHDRISDESAHFPFALKVVEKSSFASKVDAERRARWEIQVLSRLSFPKPPHPFLPDIVGSFESDEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRTLTRRTVKDVVSLENTGHEKPPIAVRRKPGRNLTRWIMATSNVKNGLKKAKSARVSPVSRRKSSFTNGERSNSFVGTEEYVSPEVVKGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKSPELIGKRSDLTDLIERLLVKDPTKRLGYGRGACEIKEHAFFNGVKWDLLTEVTRPPFLPQREETEWTGNVRLGCVSITEYFHKERSPPSFPASPSATTPSTSFSWENNKMSLTEF* 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 899509 900774 - Chy5G091640.1 Chy05g00118 226345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00118 421 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Chy05g00118 421 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Chy05g00118 421 Gene3D Transferase(Phosphotransferase) domain 1 112 181 - -
Chy05g00118 421 ProSiteProfiles Protein kinase domain profile. 18 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00118 421 SMART serkin_6 18 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00118 421 PANTHER FLIPPASE KINASE 1-RELATED 13 393 - -
Chy05g00118 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Chy05g00118 421 Pfam Protein kinase domain 241 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00118 421 Pfam Protein kinase domain 21 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00118 421 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 13 393 - -
Chy05g00118 421 Gene3D Transferase(Phosphotransferase) domain 1 243 366 - -
Chy05g00118 421 SUPERFAMILY Protein kinase-like (PK-like) 19 409 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01413 Chy-Chr1:19406602 Chy05g00118 Chy-Chr5:899509 1.64E-96 dispersed
Chy05g00118 Chy-Chr5:899509 Chy02g00475 Chy-Chr2:2924268 1.03E-76 dispersed
Chy05g00118 Chy-Chr5:899509 Chy08g00920 Chy-Chr8:16632692 8.53E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71255 PF00069 Pkinase 1.50E-29 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00118 - K08286 csv:101207338 826.239