Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00164 ATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCGAATTGACAGATGCGGTTCAAGGACTAGTTCTTTGCGATCAGAGCGATAAAGATCGGAGGGCTATGGCAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCTGTTCAAGAACAAGTAACTTGCGACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATCTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCATCGTACACTCAGAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTATAAACCTCTAATCATTGAAGAACGGGAGGAAACGTATGATGATCCTGAGGATGACCAATACTATCCTTATGAGGATGATGATGAAGAGTTAGAGGATGCTTACTTGGGTGAATCACCATCCCTTCGCATCGGGAATCGAAGGTGGGGATACAATGGTTATGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTCCTTAGGCAGGAGTTTACTGGACCTAGTTCATCGAGGGAGCCCGTAACAAAACAGGCTTCTTCCAACGACAAAACAGGCCGACGTGCTAAAAGGGCCTTGAAACGAGAAGCTGCAGATAAAGCAGCAGCAGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGA 831 47.17 MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGPSSSREPVTKQASSNDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK* 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1299445 1302209 + Chy5G092100.1 Chy05g00164 226391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00164 276 MobiDBLite consensus disorder prediction 224 242 - -
Chy05g00164 276 ProSitePatterns Zinc finger RING-type signature. 97 106 IPR017907 -
Chy05g00164 276 SUPERFAMILY RING/U-box 78 129 - -
Chy05g00164 276 MobiDBLite consensus disorder prediction 223 276 - -
Chy05g00164 276 MobiDBLite consensus disorder prediction 243 276 - -
Chy05g00164 276 Pfam Ring finger domain 78 122 IPR001841 -
Chy05g00164 276 SMART ring_2 79 121 IPR001841 -
Chy05g00164 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 144 IPR013083 -
Chy05g00164 276 ProSiteProfiles Zinc finger RING-type profile. 79 122 IPR001841 -
Chy05g00164 276 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 39 276 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00164 - - csv:101206609 481.87