Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00185 ATGGAACTCAGAAAGTACAAACCTGCCTTCCTCCTCCTCCTCCTCCTCTTCCTCTCCATCTCCGGCCGATCCGCCGTCCACGCCTACAAAAACCACACCGTCGGCGATTCCCTTGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAGGAATGGACCTCCGGTAAAACCTTCGGTCTCGGCGATTTTCTAATTTTCAACACGGACAACAACCACTCGGTTGTGCAAACATACAATGTCACCACATACAAGCTTTGTGACTACAACGACGCATCAGATCACGATACGACGGAATGGTCCGCCGCTGATCCGTCCGCAACCACTCCCTACCCCGTCACGGTGGCTGTCCCCTTGGTTAAAGAAGGCCCCAACTACTTCTTCTCTGGCAACTACGACGGAGAGCAGTGCCAAAATGGGCAACAGTTCAACATAAATGTCACCCATGGACAGGGCCTCCCTAAAAGCTTGAGAGATCCTTCGGAGGAAGCTCCGGCTCCGGTAGTTCCTGACACCGGCGATCAAACCGAATCTGCACCAGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGATGTCGCTGATAATAATAACGATAAGGAATCTTCGGGCTCGAATTCGTTATCGCTTGTTTATTGCTTCAAGTTTAATGAGTTTTTGTTCTTGTTAGTTGGTATTGCCTCTGCCTGCTTTTTGTCTTTGTACTGA 717 50.07 MELRKYKPAFLLLLLLFLSISGRSAVHAYKNHTVGDSLGWFDKLEKPAVDYQEWTSGKTFGLGDFLIFNTDNNHSVVQTYNVTTYKLCDYNDASDHDTTEWSAADPSATTPYPVTVAVPLVKEGPNYFFSGNYDGEQCQNGQQFNINVTHGQGLPKSLRDPSEEAPAPVVPDTGDQTESAPDTIVPSSFDNPRNDVADNNNDKESSGSNSLSLVYCFKFNEFLFLLVGIASACFLSLY* 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1480177 1484357 - Chy5G092310.1 Chy05g00185 226412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00185 238 CDD Phytocyanin 30 148 - -
Chy05g00185 238 Gene3D - 28 151 IPR008972 -
Chy05g00185 238 MobiDBLite consensus disorder prediction 176 208 - -
Chy05g00185 238 ProSiteProfiles Phytocyanin domain profile. 30 150 IPR003245 GO:0009055
Chy05g00185 238 SUPERFAMILY Cupredoxins 30 148 IPR008972 -
Chy05g00185 238 MobiDBLite consensus disorder prediction 149 208 - -
Chy05g00185 238 PANTHER BNAA08G26900D PROTEIN 10 174 - -
Chy05g00185 238 PANTHER BLUE COPPER PROTEIN 10 174 IPR039391 GO:0009055
Chy05g00185 238 Pfam Plastocyanin-like domain 40 142 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00185 Chy-Chr5:1480177 Chy03g01346 Chy-Chr3:16409782 3.65E-13 dispersed
Chy05g00185 Chy-Chr5:1480177 Chy11g01992 Chy-Chr11:25820530 1.19E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00185 - - csv:101203070 481.485