Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00194 ATGGGGGATATTAGAAAATGGTTCATGAAAGCACACGACAAAGATAACGGCAGTGGGTCAAAGAAAGCAAAACCGGCTCCAAGCAGCTTAGAGAAATCCGCTTCAGCTGGAAAAACAGGGCCGAGTGGTGGAGAAAGTACTGGCAGACGGATAACTAGCAAATATTTTGCATCAGAAAAGCAGGAGGCCAAGGATACAGAAGAAACAGAGGTACCCCCGATCATACGGAAGTCCCCACAGGATACTAAGGAATCACCAGCCAAAAGAAAGTTTCAAAAGTATAATGAGGAATCACCGAAAGCTTCACCTTTAAAAAAATCAAACAAAGTCGATGACAATGATGATGTTGCTGTTCTTTCTAGTTCTAAAAAGAAAATGTCTGAAGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAACCTGTTGAAATTGAAGCGAGTGATGATGAGGAAACTAAGGGCACCGATTCTTCTCTAAAGCCCAGTGGAAGGGGTAGGGGTGGAAGAGGTTCGTCTGCTGCAACCATTGGTGGTAGAGGCAGAGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAGGGGGAAAAGGAAGTCCCTAAAGGTGCTCCGGACTGTTTAGCTGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGTCTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCACGGTGGCCGAGTAACTGGATCTGTCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCTTCCAAAGCAAAAGAGCTGGGAACTGGTTTTCTCACTGAGGATGGCTTGTTTGACATGATCCGTGCATCTGGCAAAAAAGCTCCTCCAAGGCAAGATCCTAAAAAATCTGTGGTTAAATCTGAAGAATCTCCGACAAAGAAAAATTTCCAGAAAGTGCAAGCAAAATCCCACAAAGATTTGGCTGCTGGTGCTTCACCTGCTAAGCAAAAAAGCAGAACTGCTGAATTCTCTAACCTAACATGGACAGAAAAATATAGGCCAAAGGTTCCAAATGACATTATAGGGAATCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAAAACTTCCTGGATGTTGGAAGCAAAAAGAAGGTTAAAAAGGCCAGTGATTCTGGTGCGAAAAAAGCTGTCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTAGTTAGTCAGATGCTTGGTTTTGAGGCTATAGAGGTTAATGCCAGCGACAATAGGGGTAAATCAGATGCCAAAATTCAAAAGGGAATTGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCACTTCATTTCAAAATGGATCAGCCAAAACATCACAAAACTGTGTTGATCATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGGGTTGCTGATCTGATTGCGAGTATTAAGACGTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAACTGAAAAGCCTCGTGAACTATTGTCTTATTCTCAGCTTTAGGAAACCTACAAAACAACAGATGGCAAAAAGATTAGTTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTTTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAAGAAAGATGAAGACATCTCACCATTCACTGCTGTTGACAAGCTGTTTGGTTTTAATTCTGGGAAGTTGAGGATGGATGAAAGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTGCTGTTAGCAAGGATGACACTGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTGTTGCTTCTTGTATAATCCCAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGTATGAGCGTAATTTTAATAGATTTGGCGCATGGCTGGGAAAAAATTCAACATTTGGAAAAAATATGAGGCTTCTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGGAACACCTACGAGTTGAGAACCTTACTCTCTTTCTAAAGAGGTTGACTGAACCACTGCACATGCTGCCTAAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGTCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCTGCGGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTGCACTTCCTGGAATGAAAAAAGCCCCTAAGAAGCGAATTGCAGCAATTCTAGAACCGACTGAGGATACAGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGAAAATTCCACAAATGGTGAGAAGCTGCAATTGGAACTTCAAAGCTTGAATAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGGGGTAGAGAAAGAGGAGGTAGAACTTCTCAGGCTTCAGAGAAGAAAGGTGGTCGAGATTCAACTTACAAATCCCCACCTCCACTACCCACAATGAATAAGGCTCGGATTAAGAAGATAATGCAGGCCGATGAAGATGTAGGGAAGATAGCTATGGCAGTCCCACTTTTAGTCTCAAAGGCACTGGAACTATTTTTACAAAATTTATGTAACAGAACGTATGAGATTACTCTGAAGAGGGGGGCTAGGACATTGAACTCTTTGCACTTAAAGCAATGTATTCAGACGTTTAATGTTTTTGATTTCTTGAGGGGTGTTGTGGGCAAGGTCCCTGATTTAGGTGGCTCTGATGCTGCGGAGGACCGGCAGATTTCCAAAAGAAGGAAAGTTGCAGATGAAGATGGTGGCAACGATAGTGATGAAGAATCCAAAAGGAGTAAGATGACAGAAGCTGGGCATTGCATCAGTGGCCGAGGAAGAGGTAGGGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGACACTTGGAGAAGGATACAGGCATACATTATGATAACTTCGAGGATGATATGGAAATCCCTGATCATCTCGATGATGACCTCCACAAAACTGAGCCTGACAATGGTGTCGCAGAAGCTCGAGTAGAGAACGATAATACTCTGGTTGACAAAGCTTTAGAACCATCGGTTCGAAACTTTGACTTGAACGTAAACTTGGACGAAGATGGTGATTCAACTTCAATTCCAGTGGCCGCTTCTACAGGTTCACCAGTAAAGCGCCCCACCGATTCAAAACATGATGAATACCCTGGTTGGTCAGTGGCTGAAATGGAAAAGATGGCTATTGATCCAATTCAACTAGCGAATATAAATGAGACTATAGACGATGAGGAAGATTATGACGAAGAGGGTCAATCTAATCAAAGATTTGATTCCTTTTTCAACAGTAATTTGCTGAAGAAGAGAAGCACAGCTCCAATGGAGGCAACACCAAACGAAAGCGAAGACAAGGGAATTGGATCCTCAATTTCATTATACTCCTTTCATTTATGGAACCAAATTGTATCATTTTTGCCATCTCGTCATGATTCCAATTTTCTTTGGAAGCTTTTGAGTCTCCTTCGTCGGAAGAGACGCAAGACTGGTCTTCCTCTTCCTCTACCTTTGAACTCGATAAACTCTTCTGTTGCCCACTGGGCCAAAATGGATGAAATGGTACCTTTGCACACAAAAAATTCAAAGATGAATCTCAATTCCACGATGCTATATAATTCTCAACACTTGATGAATTCCTATTTCAACAGTAATTTGCTGAAGAAGAGAAGCACAACTCCAATGGAGGCAGACAAGGGAATCGGATCCTCAATTTCATTATACTCCTTTCATTTATGGAACCAAATTGTATCATTTTTGCCATCTCGTTATGATTCCAATTTTCTTTGGAAGCTTTCGAGTCTCCTTCGTCGGAAGAGACGCAAGACTGGTCTTCCTCTTCCTCTACCTTTGAACTCGATAAACTCTTCTGTTTTAACAGTAACTGGCTGGGAACCAGCAGAGGCTTCTAGACTGTACGATGTTTTGGGAGATCTCTTGGAGCACTGTTTCTCAAATTTACATAGCATTTGGAAGAACCTGCAATTCTGGCAATCTCGTGCAGAGGGTACAAATGCTCAAAAAGTTTACTTTTTGATTTGTGAGAGAGGTCCAAGGGCGTTTTTCAGTGGAACAGTGCAGTTAATGCGCCAAAGTCTTAGGGATGGTTTTTCCTTGCAACATGTAGCTCGTGAGGCATCTCTTTACATAGCTCACCGGATAAGTATATTGAGCAACTTAAGATGTCATCTTGCAGTTTTTGTGGCTCAGGTCTTTATGGAAATTGACAAAATTGGGGCAGAGGCAGTGGATGGTCAAGAAAATTCCTTGCCTTCATTGTTGGTTACATTGAATGGCTTATTTCTCGATCTAGAGGCATCCATTTGTCAACTGCATGCAACACCTCATATGGATTTTATTGATGACAGCGTTTCATTTCCTCTATTTGAAAAAGTACCAGATGTGAACAAGGAGGGATCTCAGTGGACAAGTTGTGAAATTAGTGATGCTATCAACTTGCTTTATCAGAACCTTCATAAGTTGGACTCTTTCATCTCTAGTCTTGTTTGTAAACATCGAAAGCCAAGGAAACTAACTCAATACTGGCTTGGATATTCTTGTGGTGCAATTGGTCTTTCAATCTGTTCTGCTTGGCTTGTTCAACATAGTAGTTTAATGGGGAGCAATGATATTGAGAATTGGGTTCGCGAAGCACATAATTCAGCAGCTAGTTTTTTCAAGGATCATGTAGAACAACCGCTTATTTCAATTAGAGATGAACTTTTTGATACATTTAGAAAGAGGCATAAAGGTGTGATGGAGGTTCAAGAGGTTCAGTTAACTGCTATCTCGCTGCACAGAATGTTACTTGCTTTCAGTGAGCACACAAAAGGCCAGAAGTTTCCAGACGATGCATCGGATCAAGAAATGCTTGCAATAGTTATGACCAGGTATGAGAAAGAACTGATGCATCCCATTCAAAATCTTCTTAGCGGAGAGCTGGCCCGTGCTTTGCTTATCCAGGTGCAGAAGCTAAAATTAGATATTGAGACGGCAATGCTTGAGCTTGACCAGATTCTCAAGGCAAATGAAATCAACTTTGCTGTTCTAGCTGCATTGCCTGCATTCTTTCTCTCACTTCTTTTGCTGATGCTTTTGCGTACGTGGTATAAACAGGACACTAGAGCTGAAGGGAAGGGAAGAGCTGCTCGGCTTCAGAGAAGACTACTAGTTGTGGAGGTGGAGAAAGCAATAATGCAATACCAGAGTTTTGTTGACCAAGGACGTGTAAAAGATGCTGAATGTAGATTTGGGTTACTGTTGTATAGTTTGGGTAGGTTGTACCATGCTTCCGAGAAGCATGCCAAAGCAACTGGTGAATGGCTACATTTGAGGCAGGATATTTTGGACCTGGGAAAGACCAGTCTTCCAACAAGTGATAAGCTCAGAATTACCTGGCGCATGGAACGGGTATACGATTGTTTACTTCCTGCATTGAAACGTTCATAA 5916 42.16 MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGESTGRRITSKYFASEKQEAKDTEETEVPPIIRKSPQDTKESPAKRKFQKYNEESPKASPLKKSNKVDDNDDVAVLSSSKKKMSEVTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGRGSSAATIGGRGRGGGRGGFMNFGERKDPPHKGEKEVPKGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHMLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRERGGRTSQASEKKGGRDSTYKSPPPLPTMNKARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCNRTYEITLKRGARTLNSLHLKQCIQTFNVFDFLRGVVGKVPDLGGSDAAEDRQISKRRKVADEDGGNDSDEESKRSKMTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTGIHYDNFEDDMEIPDHLDDDLHKTEPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKRPTDSKHDEYPGWSVAEMEKMAIDPIQLANINETIDDEEDYDEEGQSNQRFDSFFNSNLLKKRSTAPMEATPNESEDKGIGSSISLYSFHLWNQIVSFLPSRHDSNFLWKLLSLLRRKRRKTGLPLPLPLNSINSSVAHWAKMDEMVPLHTKNSKMNLNSTMLYNSQHLMNSYFNSNLLKKRSTTPMEADKGIGSSISLYSFHLWNQIVSFLPSRYDSNFLWKLSSLLRRKRRKTGLPLPLPLNSINSSVLTVTGWEPAEASRLYDVLGDLLEHCFSNLHSIWKNLQFWQSRAEGTNAQKVYFLICERGPRAFFSGTVQLMRQSLRDGFSLQHVAREASLYIAHRISILSNLRCHLAVFVAQVFMEIDKIGAEAVDGQENSLPSLLVTLNGLFLDLEASICQLHATPHMDFIDDSVSFPLFEKVPDVNKEGSQWTSCEISDAINLLYQNLHKLDSFISSLVCKHRKPRKLTQYWLGYSCGAIGLSICSAWLVQHSSLMGSNDIENWVREAHNSAASFFKDHVEQPLISIRDELFDTFRKRHKGVMEVQEVQLTAISLHRMLLAFSEHTKGQKFPDDASDQEMLAIVMTRYEKELMHPIQNLLSGELARALLIQVQKLKLDIETAMLELDQILKANEINFAVLAALPAFFLSLLLLMLLRTWYKQDTRAEGKGRAARLQRRLLVVEVEKAIMQYQSFVDQGRVKDAECRFGLLLYSLGRLYHASEKHAKATGEWLHLRQDILDLGKTSLPTSDKLRITWRMERVYDCLLPALKRS* 1972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1540002 1584055 - Chy5G092400.1 Chy05g00194 226421

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00194 1971 Gene3D - 350 538 IPR027417 -
Chy05g00194 1971 SMART BRCT_7 216 294 IPR001357 -
Chy05g00194 1971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 599 IPR027417 -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 931 960 - -
Chy05g00194 1971 SUPERFAMILY Histone-fold 980 1049 IPR009072 GO:0046982
Chy05g00194 1971 SMART AAA_5 402 540 IPR003593 -
Chy05g00194 1971 Pfam ATPase family associated with various cellular activities (AAA) 406 518 IPR003959 GO:0005524|GO:0016887
Chy05g00194 1971 MobiDBLite consensus disorder prediction 81 131 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1182 1197 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 32 54 - -
Chy05g00194 1971 SUPERFAMILY post-AAA+ oligomerization domain-like 610 755 IPR008921 GO:0003677|GO:0006260
Chy05g00194 1971 Gene3D Histone, subunit A 960 1048 IPR009072 GO:0046982
Chy05g00194 1971 MobiDBLite consensus disorder prediction 148 163 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 55 74 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 296 325 - -
Chy05g00194 1971 Pfam Replication factor RFC1 C terminal domain 679 841 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Chy05g00194 1971 MobiDBLite consensus disorder prediction 872 907 - -
Chy05g00194 1971 CDD BRCT_RFC1 214 292 - -
Chy05g00194 1971 CDD HLD_clamp_RFC 539 597 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1054 1090 - -
Chy05g00194 1971 Gene3D BRCT domain 191 293 IPR036420 -
Chy05g00194 1971 Coils Coil 1811 1831 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1 20 - -
Chy05g00194 1971 ProSiteProfiles BRCT domain profile. 214 292 IPR001357 -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1051 1147 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 927 971 - -
Chy05g00194 1971 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 14 939 - -
Chy05g00194 1971 CDD AAA 391 539 - -
Chy05g00194 1971 SUPERFAMILY BRCT domain 216 293 IPR036420 -
Chy05g00194 1971 Gene3D - 611 723 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1 216 - -
Chy05g00194 1971 Pfam BRCA1 C Terminus (BRCT) domain 216 291 IPR001357 -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1110 1147 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 294 344 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 1182 1204 - -
Chy05g00194 1971 MobiDBLite consensus disorder prediction 198 213 - -
Chy05g00194 1971 PANTHER REPLICATION FACTOR C SUBUNIT 1 14 939 - -
Chy05g00194 1971 Pfam ATP synthase regulation protein NCA2 1687 1961 IPR013946 -
Chy05g00194 1971 Gene3D - 539 609 - -
Chy05g00194 1971 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 973 1033 IPR003958 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00194 K10754 RFC1; replication factor C subunit 1 - csv:101204361 1786.16
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00194 Chy-Chr5:1540002 Chy10g00706 Chy-Chr10:13408346 7.22E-57 dispersed
Chy08g00054 Chy-Chr8:1871086 Chy05g00194 Chy-Chr5:1540002 1.35E-06 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy04g00760 . 107 798 Core DNA Replication Machinery Family AT4G14700 66.0 1.6e-267 919.1
Chy02g00078 . 1 376 Core DNA Replication Machinery Family AT4G14700 69.2 8.0e-155 544.7
Chy02g00080 . 83 223 Core DNA Replication Machinery Family AT4G14700 64.4 3.8e-48 190.3
Chy04g00760 . 107 798 Core DNA Replication Machinery Family AT4G12620 67.9 7.0e-276 946.8
Chy02g00078 . 1 376 Core DNA Replication Machinery Family AT4G12620 69.5 2.3e-154 543.1
Chy02g00080 . 83 223 Core DNA Replication Machinery Family AT4G12620 66.7 9.8e-52 202.2
Chy03g01522 . 2 360 Core DNA Replication Machinery Family AT2G37560 65.5 1.1e-140 496.5
Chy10g00355 . 9 413 Core DNA Replication Machinery Family AT2G01120 64.6 1.8e-153 539.3
Chy11g01648 . 3 524 Core DNA Replication Machinery Family AT4G29910 58.2 8.9e-169 590.5
Chy05g00660 . 1 254 Core DNA Replication Machinery Family AT1G26840 66.5 2.4e-90 328.9
Chy01g00870 . 34 829 Core DNA Replication Machinery Family AT1G79150 57.8 2.5e-244 842.0
Chy04g01347 . 10 939 Core DNA Replication Machinery Family AT1G44900 75.5 0.0e+00 1347.0
Chy02g00156 . 1 575 Core DNA Replication Machinery Family AT5G46280 80.7 1.1e-267 919.1
Chy01g00756 . 1 821 Core DNA Replication Machinery Family AT2G16440 76.8 0.0e+00 1120.9
Chy05g01255 . 1 717 Core DNA Replication Machinery Family AT2G07690 77.8 0.0e+00 1078.2
Chy02g00002 . 7 840 Core DNA Replication Machinery Family AT5G44635 72.0 0.0e+00 1190.3
Chy01g01752 . 4 722 Core DNA Replication Machinery Family AT4G02060 85.1 0.0e+00 1218.4
Chy11g01344 . 38 500 Core DNA Replication Machinery Family AT2G29680 60.9 1.2e-159 560.1
Chy11g01344 . 22 465 Core DNA Replication Machinery Family AT1G07270 58.2 1.5e-140 496.5
Chy01g01391 . 1 594 Core DNA Replication Machinery Family AT3G25100 76.4 4.1e-257 884.0
Chy04g02091 . 12 783 Core DNA Replication Machinery Family AT3G09660 72.6 0.0e+00 1085.5
Chy01g00231 . 10 642 Core DNA Replication Machinery Family AT2G14050 77.8 2.7e-286 981.1
Chy11g00257 . 18 420 Core DNA Replication Machinery Family AT2G20980 55.8 8.0e-116 414.1
Chy06g01182 . 7 192 Core DNA Replication Machinery Family AT1G77320 66.7 3.6e-72 270.4
Chy01g02007 . 1 196 Core DNA Replication Machinery Family AT1G80190 66.5 3.6e-72 268.1
Chy07g00809 . 743 887 Core DNA Replication Machinery Family AT3G12530 71.7 1.8e-60 228.8
Chy03g00186 . 22 191 Core DNA Replication Machinery Family AT1G19080 67.6 1.1e-62 236.5
Chy03g00186 . 22 191 Core DNA Replication Machinery Family AT3G55490 67.6 1.1e-62 236.5
Chy06g00159 . 2 164 Core DNA Replication Machinery Family AT5G49010 61.3 3.1e-49 191.8
Chy11g00218 . 1 1546 Core DNA Replication Machinery Family AT5G67100 60.0 0.0e+00 1748.0
Chy12g01485 . 81 704 Core DNA Replication Machinery Family AT1G67630 61.7 4.3e-217 751.1
Chy11g01796 . 8 447 Core DNA Replication Machinery Family AT1G67320 64.9 1.9e-183 639.0
Chy09g00091 . 7 469 Core DNA Replication Machinery Family AT5G41880 61.1 1.5e-166 582.8
Chy08g00986 . 1 1000 Core DNA Replication Machinery Family AT5G63960 80.7 0.0e+00 1652.1
Chy04g01776 . 41 282 Core DNA Replication Machinery Family AT2G42120 78.9 1.6e-117 419.9
Chy11g01796 . 8 447 Core DNA Replication Machinery Family AT1G67320 64.9 1.9e-183 639.0
Chy11g00894 . 1 2096 Core DNA Replication Machinery Family AT1G08260 71.3 0.0e+00 2984.5
Chy11g00894 . 25 2203 Core DNA Replication Machinery Family AT2G27120 67.8 0.0e+00 2949.5
Chy12g01602 . 1 258 Core DNA Replication Machinery Family AT5G22110 76.4 9.7e-119 424.1
Chy05g00194 . 1 921 Core DNA Replication Machinery Family AT5G22010 63.5 1.3e-307 1052.4
Chy06g01971 . 1 332 Core DNA Replication Machinery Family AT1G63160 90.7 6.0e-173 603.6
Chy08g00054 . 1 355 Core DNA Replication Machinery Family AT5G27740 84.8 8.6e-178 619.8
Chy07g00561 . 1 334 Core DNA Replication Machinery Family AT1G21690 81.8 2.4e-153 538.5
Chy03g00774 . 6 220 Core DNA Replication Machinery Family AT1G77470 76.2 1.8e-93 339.7
Chy03g00775 . 1 216 Core DNA Replication Machinery Family AT1G77470 78.3 3.5e-89 325.5
Chy05g01462 . 26 618 Core DNA Replication Machinery Family AT2G06510 67.7 6.6e-250 860.1
Chy06g02198 . 28 701 Core DNA Replication Machinery Family AT2G06510 51.3 1.6e-200 696.0
Chy02g02440 . 1 623 Core DNA Replication Machinery Family AT5G08020 67.6 3.7e-245 844.3
Chy06g02198 . 6 810 Core DNA Replication Machinery Family AT5G45400 53.1 9.1e-234 807.0
Chy02g02440 . 1 618 Core DNA Replication Machinery Family AT5G61000 65.9 6.3e-240 827.0
Chy06g02198 . 1 796 Core DNA Replication Machinery Family AT4G19130 54.2 5.6e-230 794.3
Chy08g01078 . 1 373 Core DNA Replication Machinery Family AT5G26680 85.6 1.4e-182 636.0
Chy06g00300 . 1 1095 Core DNA Replication Machinery Family AT1G08840 52.9 2.9e-298 1021.5
Chy11g00843 . 2 759 Core DNA Replication Machinery Family AT1G08130 69.2 5.4e-297 1016.9
Chy11g00843 . 158 759 Core DNA Replication Machinery Family AT1G49250 69.3 4.9e-243 837.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009501 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17970 PF08637 NCA2 8.20E-69 No_clan Chy TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy05g00194 Chy_Chr05 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.298489 1.337288