Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00203 ATGGCGACGTACTTCCACGGTGGTTCAGAAATCCAAAACAATTCTGACGGAATTCACACTCTTTACCTTATGAACCCAAACTACGTACCTTACTCTGACACCCACTCTCAATCTTCTCATAATATGCTTTTTCTCAACCCTTCATCAACTCACGCGCTTAACCCTTCCACTCTCCCTCACCCCCCGCCTTCCAACAACCACTTCGTCGGAATTCCTCTCCCCACCACCGACCCTCTCCGTCCTTCCTATCACGAAATCTCAACAACCCTCCATCATCATCGCCTCCACTACAATCTATGGGCTCCTGTAGACCAACAACAACAACAACAACAACAACAACCCCTCCATGCCGACTCCGCCGATTTGACCTTCCGTCGTCCGACAGCTCAACAGAGTTTGTCCTTAAGCCTCTCTTCCCAACAGTCTTTGTACCGGACGTTATCGGCTGAGCAGGAGATACAAGGCGGTGGCGGTGGTGGTGGTGCTCCGAGTGGGGAGGAAATTCGGGTGTCAGGGAATTCGGGGACGTCGGTGTCGGTGGTGTCGAGTGGGATAACGGGTGTTCAGAGTGCGATATTGGGGTCTAAGTATTTGAAAGCGGCTCAAGAACTTTTGGACGAAGTGGTTCATGTTGGTAAAGCAAATTTTAAAACCGACAAATTTGGGGATGGGACAAAGGATAAGATGAAAATGAAGAAAGAATCAACGACTACCATTGGCGGTGGCGGTGAAACTACTTCCAAGTCTGTTGCTGAGCTTAGTACTGCTCAAAGACAGGACCTTCAGATGAAAAAAGCTAAGCTTATTGGAATGCTTGATGAGGTGGAACAGAAGTATAGACAATACCACCAACAAATGCGAGGAGTAGTGAGTTGTTTCGAGCAAGCAGCAGGTTTGGGGTCAGCGAAATCGTACGCATCACTGGCCCTCGAAACGATTTCAAAGCAGTTCAGGTGCTTAAAAGATGCAATATGTGGACAAATAAAAGCAACAGGAAAAAGCTTAGGAGAAGATCAAGAGAATTGGTTGGGTTCTTCAAAAATGGAAGGATCATCAACAACATCATCATCAAGATTGAGATATGTCGATCATCATTTAAGGCAACAAAGAGCTCTTCAACAATTGGGAATGATTCAACATAATACTTGGAGACCTCAAAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTTCACCCGTATCCTAAGGATTCTGATAAGATCATTCTTGCTAAACAAACTGGTCTCACAAGAAGCCAAGTATCAAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAGGAAATGTATTTGGAGGAAATCAAAGAGCAAGAACAAAATGGGGATTCCCAAGACATGATTAGAGGAGGAGGATCACATCATCAAAATAACAACAACAATAATCATACTCATAATGATCCACAGTATTCCAAGACAGAAAATTTGATGAACAACAACCCATCCCATTCTTCAATCTCATCCTCCTCAATCTTAGGAATAGGATCGACAACCGTGGGTGGCGGTTTCAGCCTTGTACCACCATCATCTGACAATAACATCCTCCTCTCAACTCCCAAGAAACCAAGAACAACCACTACCACCACCGCCGTCACGACGACAAACAACAACGTTGTCTCAGAAAACCCTTCCTCAGAATCCATGCTTCTAAGAGACATTGATATTGTTAATTCCAACTCATACCCAGTTGGTGAAATTGGATCAACCTTCAATTCTGAACTTTTAACTCCAAGGTTTCATGCAAATGGTGTCTCTCTCACTCTTGCCCTTCCTCATAATAATTCAGATCATCTCTCACTTTCACCCAACCAAACAAATTACCATCATCTCTCTTCCAACCAAAACCTTCACTTAGGTAGATCATCAAGGCTTGATATCACCAATCATCATCCTGGACCATCCAATTTCTCCGACGTCAATCCCGCTGCCCCGCCCTCCTACGACCACGTCGATATGCAAACCACCAAAAGGTTCGCCGCCCAATTATTGCCTGATTTTGTTGCATGA 2061 44.64 MATYFHGGSEIQNNSDGIHTLYLMNPNYVPYSDTHSQSSHNMLFLNPSSTHALNPSTLPHPPPSNNHFVGIPLPTTDPLRPSYHEISTTLHHHRLHYNLWAPVDQQQQQQQQQPLHADSADLTFRRPTAQQSLSLSLSSQQSLYRTLSAEQEIQGGGGGGGAPSGEEIRVSGNSGTSVSVVSSGITGVQSAILGSKYLKAAQELLDEVVHVGKANFKTDKFGDGTKDKMKMKKESTTTIGGGGETTSKSVAELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMRGVVSCFEQAAGLGSAKSYASLALETISKQFRCLKDAICGQIKATGKSLGEDQENWLGSSKMEGSSTTSSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGGGSHHQNNNNNNHTHNDPQYSKTENLMNNNPSHSSISSSSILGIGSTTVGGGFSLVPPSSDNNILLSTPKKPRTTTTTTAVTTTNNNVVSENPSSESMLLRDIDIVNSNSYPVGEIGSTFNSELLTPRFHANGVSLTLALPHNNSDHLSLSPNQTNYHHLSSNQNLHLGRSSRLDITNHHPGPSNFSDVNPAAPPSYDHVDMQTTKRFAAQLLPDFVA* 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1699963 1703283 - Chy5G092490.1 Chy05g00203 226430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00203 686 MobiDBLite consensus disorder prediction 641 663 - -
Chy05g00203 686 MobiDBLite consensus disorder prediction 462 493 - -
Chy05g00203 686 Gene3D - 386 464 - -
Chy05g00203 686 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 637 - -
Chy05g00203 686 SMART prehox3 186 326 IPR006563 -
Chy05g00203 686 Coils Coil 258 285 - -
Chy05g00203 686 Pfam Associated with HOX 192 324 IPR006563 -
Chy05g00203 686 SUPERFAMILY Homeodomain-like 384 449 IPR009057 -
Chy05g00203 686 Pfam Homeobox KN domain 400 439 IPR008422 GO:0003677|GO:0006355
Chy05g00203 686 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 637 - -
Chy05g00203 686 CDD homeodomain 383 444 IPR001356 GO:0003677
Chy05g00203 686 ProSiteProfiles 'Homeobox' domain profile. 380 443 IPR001356 GO:0003677
Chy05g00203 686 MobiDBLite consensus disorder prediction 641 659 - -
Chy05g00203 686 SMART HOX_1 383 447 IPR001356 GO:0003677
Chy05g00203 686 MobiDBLite consensus disorder prediction 152 175 - -
Chy05g00203 686 MobiDBLite consensus disorder prediction 455 493 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01640 Chy-Chr3:18276116 Chy05g00203 Chy-Chr5:1699963 2.51E-42 dispersed
Chy05g00203 Chy-Chr5:1699963 Chy11g00350 Chy-Chr11:3195879 1.66E-92 dispersed
Chy04g01857 Chy-Chr4:24758171 Chy05g00203 Chy-Chr5:1699963 4.44E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17972 PF07526 POX 7.30E-46 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00203 - - csv:101220747 1155.2