Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00248 ATGCAGACCGATCACCGTAAGAAGAATTCTGCAGAATTGGACTTTTTCTCTGAATATGGTGATGCCAACAGATTCAAAGTCCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTTGAACATGTATCTGATGCTGCCCGGATTCTTCGTGAGATAAAGCTCCTCAGGCTTCTGCGCCATCCCGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAATGATGATTTAACAAAAGAGCACTATCAATTTTTCCTCTACCAGCTACTACGTGCACTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCGAATTGCAAACTTAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCGGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCCGCCATTGACATATGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCAATACCCTTTACTCAGAAGTTCCCAAATGCTGATCCGCTAGCTCTACAATTGCTACAACGGTTGCTTGCCTTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCATTGGCAGATCCTTACTTCAAGGGGCTGGCTAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAAGTCACAAAGGATGACATTCGCGAGTTGATATTCCTTGAGATACTTGAATACCATCCTCAACTGCTGAAAGACTACTTAAATGGAAACGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTCAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTCTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTGCAGTCAAATACCATTCCTCCTAAAGTAACATCAAATATTGTTTCCTTTAAAGATCGATATGCGCCAACAGCTCCTTTCGGCAGTCAGCTTTACAAAGATTCGGCAGCACAGAGGATTGCTGCTGCTCAAGCCAAGCCTGGAAGAATCTCAGGCCCGGTTGTGCCATATGACAGTGGAAGTATCATTAAAGATGCTTACGACCCACGAATGTTAATTAGAAGTGCCCTCCCTTCTCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACAGGGGCTGAGAAGGATACGTCCATGCAATGCAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTGCCACTGGTGCTTTCTCAAATTCTTTCTTTATGGCACGTGTAGGCATGCCCAAGATGGGAAACAATGACCGTGCTGCACATTTGCAGGTAAGAGCCCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCGCTACCCATCGAAACACTGGTGTGGTTGATTATGGCATGACCAGAATGTGTTAG 1821 42.45 MQTDHRKKNSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFTQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGNERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKVTSNIVSFKDRYAPTAPFGSQLYKDSAAQRIAAAQAKPGRISGPVVPYDSGSIIKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEERSATGAEKDTSMQCKQSPQCGMAAKLAGDTAAATGAFSNSFFMARVGMPKMGNNDRAAHLQVRAQYDAGAVAAATTATHRNTGVVDYGMTRMC* 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2100735 2104422 + Chy5G092940.1 Chy05g00248 226475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00248 606 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Chy05g00248 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 471 - -
Chy05g00248 606 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00248 606 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Chy05g00248 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 471 - -
Chy05g00248 606 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Chy05g00248 606 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00248 606 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy05g00248 606 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00248 606 CDD STKc_TDY_MAPK 24 361 - -
Chy05g00248 606 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00248 Chy-Chr5:2100735 Chy11g01004 Chy-Chr11:14174479 0 dispersed
Chy05g00248 Chy-Chr5:2100735 Chy02g02318 Chy-Chr2:27194904 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71262 PF00069 Pkinase 9.60E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00248 - - csv:101214068 1162.9