Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00267 ATGGCGGCTACAGATTGCTCTCTCACTCTGGCCCAACTCCTCGGTCCAAATGTCACCAACTCCGGTGCCGCCGCCTCCTTCATTTGCGACCAATTCACCACCTCCACCAACAACTTCTCCGATACCAAATTCGCCGTCGACACCGTCTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAACTCGGCTTCGCCATGCTCTGTGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTTGACGCCGCTGCCGGTGGCCTTTTCTACTACCTCTTCGGTTTCGCCTTTGCTTTTGGCACTCCCTCCAACCCCTTCATCGGCCGTCATTTCTTTGGCCTCAAGTCAATCCCGTCCACAGCCGCCGATTACAGCTTCTTTCTCTATCAGTGGGCTTTCGCCATCGCCGCCGCCGGTATCACCAGCGGCTCAATTGCCGAGCGAACCCAATTCGTTGCCTATTTGATCTACTCCTCTGTTTTGACCGGTTTTGTTTACCCGGTTGTGTCCCATTGGTTCTGGTCTCCAGACGGTTGGGCCAGCCCGTCACGGTCTAATGGTGATCTCTTATTTGGAACCGGAGTCATAGATTTCGCCGGTTCAGGCGTGGTTCACATGGTTGGTGGAATCGCTGGACTTTGGGGTGCTTTAATAGAAGGTCCACGAATTGGCCGATTCGACAAAACCGGTAGATCCGTTGCTTTACGAGGCCATAGTGCTACGTTAGTCGTTCTCGGTACGTTCATGCTTTGGTTCGGTTGGTACGGGTTCAACCCCGGTTCCTTCACTAAGATCTTAGTTCCTTATGGTTCAAATAATTTCTACGGACAGTGGAGCGCTGTCGGTCGGACTGCCGTGACGACAACACTAGCTGGTTGCACAGCAGCACTAACGACCCTTTTCGGAAAACGAATTTTATCCGGCCATTGGAATGTCACCGATGTCTGCAACGGCTTACTTGGTGGGTTCGCCGCCATAACCTCCGGCTGCTCGGTGGTGGAGCCGTGGGCAGCTGTGATATGTGGGTTTATGGCAGCGGTGGTTTTAATCAGCTGCAATAAACTAGCAGAGAAGGTGAAATTCGACGACCCATTAGAGGCGGCACAATTGCACGGCGGTTGCGGGGCGTGGGGGATAATATTCACGGCTTTGTTCGCGACAAAGAAGTATGTAAACGAGGTGTACGGCGGGGATACGGGGCGGCCACACGGGTTGTTTATGGGTGGGGGAGGGAAGTTGTTGGGTGCACATTTGATACAAATTTTGGTGATTATTGGTTGGGTTAGTGCTACAATGGGGCCATTGTTTTATGGGTTACATAAGCTGAAACTACTAAGAATCTCGTCGGAGGATGAGATGGCCGGAATGGATATGACTAGACATGGTGGATTTGCTTATGTCTACCATGATGAAGATGAATCTCCGACCAATGGGATCCAAATTAGTAGGATTAAGCCAAGGGAAACAAGTCCAATTGAAAATTAA 1503 51.76 MAATDCSLTLAQLLGPNVTNSGAAASFICDQFTTSTNNFSDTKFAVDTVYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSIPSTAADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPSRSNGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDKTGRSVALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILVPYGSNNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVICGFMAAVVLISCNKLAEKVKFDDPLEAAQLHGGCGAWGIIFTALFATKKYVNEVYGGDTGRPHGLFMGGGGKLLGAHLIQILVIIGWVSATMGPLFYGLHKLKLLRISSEDEMAGMDMTRHGGFAYVYHDEDESPTNGIQISRIKPRETSPIEN* 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2437527 2439029 + Chy5G093130.1 Chy05g00267 226494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00267 500 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 495 - -
Chy05g00267 500 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Chy05g00267 500 PANTHER AMMONIUM TRANSPORTER 5 495 - -
Chy05g00267 500 SUPERFAMILY Ammonium transporter 46 453 - -
Chy05g00267 500 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Chy05g00267 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Chy05g00267 500 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00267 Chy-Chr5:2437527 Chy06g00417 Chy-Chr6:2834934 0 dispersed
Chy03g01149 Chy-Chr3:14748208 Chy05g00267 Chy-Chr5:2437527 8.64E-26 transposed
Chy04g02279 Chy-Chr4:27373563 Chy05g00267 Chy-Chr5:2437527 4.46E-25 transposed
Chy04g01131 Chy-Chr4:17483576 Chy05g00267 Chy-Chr5:2437527 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00267 K03320 - csv:101212168 965.681