Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00296 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCGGTGGCGACAGAAGTAGCCAATTCCAATCCCCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCCAGGCCGAAGCAAGGTGCTGCTTGGGGCACCTCTCTTCGCAAGGTCTATACCTTCGACACCGTCGAAGAATTTTGGTGTTTATACGATCAGTTATTCAAGCCAAGCAAGTTACCGGCGAATGCAGATTTTCACCTGTTCAAAACTGGAGTTGAACCGAAATGGGAAGATCCCGAGTGCGCTAATGGAGGGAAATGGACTGTCACCAGCAGTAGAAAGGCTAACCTTGATAATATGTGGCTGGAAACGTTGATGGCCTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCTCTGTGGACCAAGACAGCAACAAACGAGGCTGCTCAGATGAGCATTGGTAGGAAATGGAAGGAGATTATCGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGATTTGAGAAGGGAAAAGTCGGCAAAAGCTCGATATAGTGTTTGA 606 48.84 MAGEVAVEGAVAAVATEVANSNPQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKTGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV* 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2885260 2887225 + Chy5G093420.1 Chy05g00296 226523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00296 201 Pfam Eukaryotic initiation factor 4E 27 183 IPR001040 GO:0003723|GO:0003743|GO:0006413
Chy05g00296 201 ProSitePatterns Eukaryotic initiation factor 4E signature. 82 105 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Chy05g00296 201 Gene3D RNA Cap, Translation Initiation Factor Eif4e 17 201 IPR023398 -
Chy05g00296 201 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 8 193 IPR001040 GO:0003723|GO:0003743|GO:0006413
Chy05g00296 201 PANTHER BNAA08G29940D PROTEIN 8 193 - -
Chy05g00296 201 SUPERFAMILY eIF4e-like 15 194 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00296 Chy-Chr5:2885260 Chy12g00020 Chy-Chr12:245413 9.28E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00296 K03259 - csv:101208495 392.504