Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00316 ATGGAAGCTACCAGGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATCCTTCAAGAGCTCCAACTAGTGAAGATGTACCCTCAAATGTCACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTATATAGAAAATCATTACAAGAAACAGATGAAGAGCTTGGAAGAAAGGAGGGAGAGGCGTCATGTACTAGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAAAGCAACCTGCTGAAGCATCTGGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGTCATGTATATGCCATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAACCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTACTGCTCTTTCCAAGATGAGGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGAAAAGATACTCTAACTGAAGATGAGGCTCGATTTTATGTTGGCGAAACAGTTTTAGCTATTGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGATGGCCATATGAAATTATCGGATTTTGGATTATGTAAACCATTAGATTGTAGCAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTTAGTGGTGCTCTTCAAAGTGACGGGCGTCCTGTGGCATCAAAACGCACCCAACAGGAACAACTACAGCATTGGCAAAGAAATAGGCGGATGCTTGCTTATTCTACGGTTGGAACTCCTGATTATATTGCCCCAGAAGTTCTGCTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTTGTGGGATTTCCACCGTTTTACTCAGATGAGCCAATGTCTACTTGTCGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAACTCTCTCCAGAAGCCAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGTACCAAGGGTGCAGATGAAATAAAGGCGCACCCGTGGTTCAAGGGCATTGAATGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACGCACTTCAAACTTCAACAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTAGGTTATACGTACAAAAACTTTGAAATCATTGATGATAATCAATTGCCCGGAATCGCTGAATTGAAGAAGAAGAGCGCAAAATCTAAAAGACCTTCCATCAAATCACTCTTTGATAACGAATCGGCAATGGCTAATCAACCCGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAGCTAGAAGTCCCGGAGAAACCAATGAACACAAATGAGAAGCATTCATGA 1656 40.7 MEATRCWFNKFRSKDKPKPSTNKESTGNARDPSRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENALQTSTKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKSAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKPMNTNEKHS* 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3138712 3144403 - Chy5G093620.1 Chy05g00316 226543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00316 551 Gene3D Transferase(Phosphotransferase) domain 1 203 269 - -
Chy05g00316 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 520 - -
Chy05g00316 551 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy05g00316 551 MobiDBLite consensus disorder prediction 7 21 - -
Chy05g00316 551 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00316 551 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Chy05g00316 551 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 520 - -
Chy05g00316 551 MobiDBLite consensus disorder prediction 1 50 - -
Chy05g00316 551 MobiDBLite consensus disorder prediction 22 50 - -
Chy05g00316 551 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00316 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Chy05g00316 551 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00316 551 Coils Coil 68 102 - -
Chy05g00316 551 CDD STKc_NDR_like 117 482 - -
Chy05g00316 551 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Chy05g00316 551 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Chy05g00316 551 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy05g00316 551 MobiDBLite consensus disorder prediction 525 551 - -
Chy05g00316 551 SUPERFAMILY Protein kinase-like (PK-like) 94 470 IPR011009 -
Chy05g00316 551 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Chy05g00316 551 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01478 Chy-Chr1:20526090 Chy05g00316 Chy-Chr5:3138712 0 dispersed
Chy02g00061 Chy-Chr2:447668 Chy05g00316 Chy-Chr5:3138712 0 dispersed
Chy03g01545 Chy-Chr3:17622656 Chy05g00316 Chy-Chr5:3138712 0 dispersed
Chy05g00316 Chy-Chr5:3138712 Chy07g00261 Chy-Chr7:2059432 0 dispersed
Chy05g00316 Chy-Chr5:3138712 Chy02g01246 Chy-Chr2:9075709 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71266 PF00069 Pkinase 1.00E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00316 K08790 - csv:101205120 1110.52