Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00324 ATGAGTCAACAAGTTGGAGTTCTAAACGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACTGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCTTACGATCTCTTTTGTATCTCCATAGTCACTAAGCTTCTCGGTCGAATCTATTACCATATTCCAAATGGCCCCAAACCCGGCTCCCTCCCTCCCAACATCGCTGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACCCTCTCTGGCCAACTATTCTTTGGCTGGCTCGGTGACAAGCTCGGCCGCAAAAAAGTCTACGGCATTACCCTCATTCTCATGGTCGTTTGCTCCATCGCCTCCGGCCTCTCCTTCAGCCACTCCCCAAAATCCGTAATTGCCACACTTTGTTTCTTCCGTTTCTGGCTCGGCTTTGGCATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCCGAATACGCCAACAAAAAAACTCGCGGCGCATTCATCGCCGCTGTCTTCGCAATGCAAGGCTTTGGAATTTTAGGTGGAGGAATCGTCGCTTTAATCGTCTCTGCCGCTTTCAACAACCGCTTCCCAGCACCACCGTACATGGACGATCCCATTCGCCCCACCATTCCGGAGGCCGATTATGTATGGCGAATCGTTCTAATGTTCGGCGCAATTCCGGCCGCATTAACATATTACTGGCGGATGAAAATGCCGGAGACGGCGAGATACACTGCCTTAGTTGCTCAAAACGCAAAACAAGCAGCGGCGGATATGTCGAAAGTGCTGCAAGTTAATCTCGAATTAAACGAACAGGAAAAATATTTCACGACCGAATCACATGAAAATCAAAACCGTTTCGGTTTATTTTCACGTGAATTCGCCAAACGCCATGGGCTTCATTTATTAGGGACCACCACCACATGGTTTCTTTTAGACATAGCTTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACCGCCATTGAATGGCTTCCATCTGCGAAAACGATGAGCGAATTAGAAGAATGTTTCAAAATCGCAAAAGCTCAGACATTAATCGCACTCTGTGGGACAGTTCCCGGTTACTGGTTCACGGTGGCGCTAATTGATTACTTAGGGAGATTTTTCATTCAATTGATGGGATTTATAATGATGACGATCTTCATGTTTGCTCTGGCGTTTCCTTATAATCATTGGAAGGAGAAGCCCCACAGAATTGGGTTTGTCGTAATGTATTCGTTGACATTTTTCTTTGCCAATTTTGGGCCGAATTCGACGACGTTCATAGTGCCGGCGGAGATATTTCCGGCTAGGTTGAGGTCGACGTGTCATGGGATATCGGCGGCGGCGGGGAAAGCAGGAGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCACAGAGTAAGGATCCGACATTGACGGATCCGGGTTACCCAACGGGGATCGGAGTAAAGAATGCTTTGATTCTGTTGGGTTGTGTGAATTTTTGTGGAGCATTGTTTACTCTATTGGTGCCGGAATCCAAAGGAAAGTCATTGGAGGAGCTGACTGGGGAGAATGAAGACGAGGACAGGAATGGAAATACAAATACAGTTAGGGATGTAAATGTTTAG 1611 48.04 MSQQVGVLNALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIPNGPKPGSLPPNIAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGITLILMVVCSIASGLSFSHSPKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVSAAFNNRFPAPPYMDDPIRPTIPEADYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVNLELNEQEKYFTTESHENQNRFGLFSREFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPSAKTMSELEECFKIAKAQTLIALCGTVPGYWFTVALIDYLGRFFIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTLTDPGYPTGIGVKNALILLGCVNFCGALFTLLVPESKGKSLEELTGENEDEDRNGNTNTVRDVNV* 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3253657 3255267 - Chy5G093700.1 Chy05g00324 226551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00324 536 Pfam Sugar (and other) transporter 25 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Chy05g00324 536 SUPERFAMILY MFS general substrate transporter 11 516 IPR036259 -
Chy05g00324 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 509 IPR020846 GO:0022857
Chy05g00324 536 TIGRFAM 2A0109: phosphate:H+ symporter 10 518 IPR004738 GO:0005315|GO:0006817|GO:0016021
Chy05g00324 536 MobiDBLite consensus disorder prediction 513 536 - -
Chy05g00324 536 Gene3D MFS general substrate transporter like domains 19 533 IPR036259 -
Chy05g00324 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 528 - -
Chy05g00324 536 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 528 - -
Chy05g00324 536 MobiDBLite consensus disorder prediction 513 528 - -
Chy05g00324 536 CDD MFS_PhT 24 508 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00324 Chy06g00476 CCT
Chy05g00324 Chy06g00476 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00324 Chy-Chr5:3253657 Chy06g00477 Chy-Chr6:3190573 0 dispersed
Chy03g00359 Chy-Chr3:4887331 Chy05g00324 Chy-Chr5:3253657 0 transposed
Chy05g00324 Chy-Chr5:3253657 Chy06g00476 Chy-Chr6:3178352 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00324 K08176 - csv:101212412 1033.48