Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00345 ATGTTTCCTACGACCTCAGACCACTACACCATCCTTACTCAGATCGGTGCCAGTCCCAACAGCACCGTGTACTTGGCCAAATGTGACTCCCAAGACTCATCCACTACCACCACTGTCACCGTCGCCATCAAAATCATCGAAACCCCCGAAGTCAAATTTGAGACCAAGTTGTTAAACAATTCACTATCGCTCATTGACCACCCCAATATTCTTCGGCCGCATTGTTGTTTCTTCGCCGACGACAACCGTCTTTGGATCGTAATGCCCTACATGCCAACCGGACCTTTACAATCCATTCTTTCCCACAGTTTTCCCAGAGGTATGCCCGATCATTTTACCTCCATTCTTTTGTACCAAGTTCTTCGTGCTTTGGTTTATCTTCACCGAATGGGGTTTGTTCATAAAGCCATTAAACCAAGCAATATCTTCTTTGATTCACAAGGCTGTGTTAAGCTCTCTGTTTTCGACATTATGATCTCTGCCGATAATAAAATTGATCGTGGTTCTTCAATTCCTTACTGGGTTCCACCCGATGATGAATATAGTTTCAAATCAGATGTTTGGGAAGTTGGTGTCTTAGCTATGGAAGCTACTTGGGGTGGTCCTCCAATTATAGACCCAAGAATTCTTGAATCACAAGTTTTGAATATCTCAAGAAGGTTTCCTTATGAATTGAAAACAGAGAAGGGTGGAAGAAAAAGTGGTGACAGAAGATTATTTGGAGATTCTGTTAAGGAGTTTGTGAAATCTTGCCTGGTAAAAGATCCATCCGCACGGCCGACATCGGTGGATTTGTTGAACCATCCATTTGTGATGAAAGGGGAGAATCCGAATAATTTCTTGTTCAAGAGTATTCCAAGAGGAGTGATTGAAATTGATAAAAGATTTCTGCAAGAAAAGGAAAAAATCATTGGGCTTATGAAAAATGATGAGGGATTGAAGAACAAGAATGAAAGTGAGAAGATTATGAAGATTAGTGGATGGGATTATAATGATTTTTTGTTTGAACTTGAACCTGATGAGGAATCAGGGAAAAGAGTTAGATTTGGTGGTGAAATCATAAGACAATTTCAAAAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGACGACGACGAAGAAGAAGGAGAGTGCAGCAAGAAAGTTGATGATACGTCATCTTTACTTGAAAGAATAGAGAGAAATTTGATGAGTAGTGGTGGTGATGGTAGTGAATCAAGCAAAAAGAAGAAAAAGAAGAAGATGATTGTTGATCAAGAAAGTTTAGTGAAATTGTTGACTTCATTGTTAGGTAATGTTCATGAACAAAGGGAGATGGTTTTGATGCTGATAAATCATGTTGGTTATTTGGGTGAAAAACGGTTGGAAATGAGTAATGAAATCAAAAGATTAGAGACAGAATTGAAATCTGAGAAAGAACAGTACTTTCAATTAGAGTTAGAATATGAATTTCTAAAACTCAAAGTTCCTGATTCTGACGATGACAAAGAATATCCTTCTGAGGCCGCATCTGATGAGACCGAAGAGAATTAG 1530 38.95 MFPTTSDHYTILTQIGASPNSTVYLAKCDSQDSSTTTTVTVAIKIIETPEVKFETKLLNNSLSLIDHPNILRPHCCFFADDNRLWIVMPYMPTGPLQSILSHSFPRGMPDHFTSILLYQVLRALVYLHRMGFVHKAIKPSNIFFDSQGCVKLSVFDIMISADNKIDRGSSIPYWVPPDDEYSFKSDVWEVGVLAMEATWGGPPIIDPRILESQVLNISRRFPYELKTEKGGRKSGDRRLFGDSVKEFVKSCLVKDPSARPTSVDLLNHPFVMKGENPNNFLFKSIPRGVIEIDKRFLQEKEKIIGLMKNDEGLKNKNESEKIMKISGWDYNDFLFELEPDEESGKRVRFGGEIIRQFQKEEEEEEEEEDDDEEEGECSKKVDDTSSLLERIERNLMSSGGDGSESSKKKKKKKMIVDQESLVKLLTSLLGNVHEQREMVLMLINHVGYLGEKRLEMSNEIKRLETELKSEKEQYFQLELEYEFLKLKVPDSDDDKEYPSEAASDETEEN* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3557828 3559357 - Chy5G093910.1 Chy05g00345 226572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00345 509 MobiDBLite consensus disorder prediction 357 383 - -
Chy05g00345 509 Coils Coil 453 487 - -
Chy05g00345 509 MobiDBLite consensus disorder prediction 490 509 - -
Chy05g00345 509 Coils Coil 354 374 - -
Chy05g00345 509 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 494 - -
Chy05g00345 509 Pfam Protein kinase domain 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00345 509 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 2 494 - -
Chy05g00345 509 ProSiteProfiles Protein kinase domain profile. 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00345 509 Gene3D Transferase(Phosphotransferase) domain 1 5 295 - -
Chy05g00345 509 MobiDBLite consensus disorder prediction 359 377 - -
Chy05g00345 509 SUPERFAMILY Protein kinase-like (PK-like) 6 298 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00345 Chy06g00495 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00345 Chy-Chr5:3557828 Chy09g00338 Chy-Chr9:2955913 1.67E-48 dispersed
Chy05g00345 Chy-Chr5:3557828 Chy06g00495 Chy-Chr6:3358171 9.22E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71267 PF00069 Pkinase 1.20E-31 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00345 K08835 - cpep:111806976 451.825