Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00362 ATGGCTCGGGACGGGCATGTAGTGCCGGTTGATCCACAGACGGCGCTTACTGTGAAGAAGAAGAAACAATCTTCTCGGAATTGGATTTTACTGGATTGTACGGGCCAAGGGACCGTCCTTGATGTCGATAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGTGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCACATAAAGGCGATCATTACTGCTGATGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGAGTGGCCAACAAGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTAGCATTGGAAGCTATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTAAGAGATGAGCTTGAACAATTACTGGACGACGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGCTCATCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGTGGGGACGAGGACGACATCGAGGAACTTGAAATGCTGCTAGAGGCTTACTTTATGCAAATTGACGGTACATTGAACAAATTAACTACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGTAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGTACTGTTTGTTTGTCTATCTATTCTTTGGTGACTGCAATATTCGGCATGAACATTCCTTACACTTGGAATGACGATCACGGATACATTTTTAAATGGGTTGTCATTATATCTGGATTCGCTTGCGCCGTGTTGTTCATCACAATTATTTACTATGCTCGCTACAAAGGTTTGGTGGGATCTTGA 1182 44.08 MARDGHVVPVDPQTALTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITADEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQSGQQDGEAEEDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWNDDHGYIFKWVVIISGFACAVLFITIIYYARYKGLVGS* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3828835 3833116 - Chy5G094080.1 Chy05g00362 226589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00362 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Chy05g00362 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 381 IPR045863 -
Chy05g00362 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Chy05g00362 393 Pfam CorA-like Mg2+ transporter protein 270 380 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Chy05g00362 393 MobiDBLite consensus disorder prediction 126 145 - -
Chy05g00362 393 Gene3D - 14 99 - -
Chy05g00362 393 Gene3D Magnesium transport protein CorA, transmembrane region 105 323 - -
Chy05g00362 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Chy05g00362 393 Coils Coil 194 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00362 Chy-Chr5:3828835 Chy05g00411 Chy-Chr5:4368486 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00362 K16075 - csv:101203841 721.079