Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy05g00369 | ATGGAGTCCGGTGGTCCGCCCACCCCTCCGCCGCTCCCTCCGCCGCCTACTGGCGCCACTCTCCTTGGCAAGTACCAATTAGGCCTTTTCCTCGGCCGTGGAAGCTTCGCCAAGGTCTATCAAGCTCGTTCTCTCGCCGATAACTCCATTGTCGCCGTCAAAATCATCGACAAGAACAAAACCATCGACGCCGCCATGGAACCCTGCATTGTCCGTGAGATCGCCGTGATGCGACGCCTTCAGCACCATCCCAACATCCTCAAAATCCATGAAGTTATGGCGACGAAAACGAAGATCTACCTCGTTGTCGATTACGCATCCGGTGGTGAACTATTCGCGAAACTCCTCCGCCGTGGTCGCTTAACGGAATCCACCGCTCGCCGTTACTTTCAACAATTAGTCTCTGCTCTTCATTTCTGTCATCAAAACGGCGTTGCTCATCGCGACATCAAACCCCAAAATCTCCTCCTCGATGAAGAAGGTAACCTAAAGGTCTCCGACTTCGGTCTCTCCGCTTTGCCGGAACAGATCAAAGACGGAATGCTTCACACCGCCTGTGGAACTCCGGCATACACCGCGCCAGAGGTTGTTTCCCGGCGAGGCTACGATGGGGCAAAAGCCGATGCGTGGTCCTGTGGTGTTATCCTCTTCGTTTTACTCTCCGGTCATCTTCCATTCAGCGATAACAACCTCGTCGCTATGTACAAGAAGGTTTATCGCCGGGAATATCAATTTCCCGATTCAATTTCAAAGCCAGCAAGACATTTGATCTTCCAATTACTGGATCCAAATCCACATACAAGGATGAGCATTGAGGCATTGATGCAACATTCATGGTACAAGAAATCATTGCGATCAAAGCCCCAAATTAGCAACAGGAGCTTATTTGATTCATTGGGTAATTACAAATCTGAATTGGGTGTTTCTGGATTGAATGCATTTGATATAATTTCAATGTCTTCTGGTTTAGATCTGTCTGGGTTGTTTGAAACAACAGATTGTAATAAGAAGAGATTCACAACAGGGGTTGGTATGGAGAAAGTGGAAGAAAGGGTAAGAGAGATTGGTGGAGAATTGGGTTATAGAGTTGAGAAAGGGAAAAGTGGGGCAATTGGGTTAGGGAAAGGGAGAATGATATTGGTGGTTGAAGCTTTGGAAATAACTTCAAATCTGTTAATGGTGGAAGTGAAGGTAGCTGAATCCAAGATGGAGTTTGAGAGGATGCATTGGGGAGATTTGAAAGCTAAGTTACAAGACATTGTTGATTCTTGGCATACAAATGAGGGAATGTAA | 1293 | 47.1 | MESGGPPTPPPLPPPPTGATLLGKYQLGLFLGRGSFAKVYQARSLADNSIVAVKIIDKNKTIDAAMEPCIVREIAVMRRLQHHPNILKIHEVMATKTKIYLVVDYASGGELFAKLLRRGRLTESTARRYFQQLVSALHFCHQNGVAHRDIKPQNLLLDEEGNLKVSDFGLSALPEQIKDGMLHTACGTPAYTAPEVVSRRGYDGAKADAWSCGVILFVLLSGHLPFSDNNLVAMYKKVYRREYQFPDSISKPARHLIFQLLDPNPHTRMSIEALMQHSWYKKSLRSKPQISNRSLFDSLGNYKSELGVSGLNAFDIISMSSGLDLSGLFETTDCNKKRFTTGVGMEKVEERVREIGGELGYRVEKGKSGAIGLGKGRMILVVEALEITSNLLMVEVKVAESKMEFERMHWGDLKAKLQDIVDSWHTNEGM* | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3929425 | 3930717 | - | Chy5G094150.1 | Chy05g00369 | 226596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy05g00369 | 430 | CDD | CIPK_C | 312 | 414 | - | - | |
Chy05g00369 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 288 | IPR011009 | - | |
Chy05g00369 | 430 | Gene3D | Kinase associated domain 1, KA1 | 308 | 422 | - | - | |
Chy05g00369 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 17 | 307 | - | - | |
Chy05g00369 | 430 | SMART | serkin_6 | 25 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g00369 | 430 | PANTHER | SERINE/THREONINE KINASE | 16 | 427 | - | - | |
Chy05g00369 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672|GO:0006468 | |
Chy05g00369 | 430 | ProSiteProfiles | NAF domain profile. | 306 | 330 | IPR018451 | GO:0007165 | |
Chy05g00369 | 430 | Pfam | NAF domain | 311 | 365 | IPR004041 | GO:0007165 | |
Chy05g00369 | 430 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Chy05g00369 | 430 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 16 | 427 | - | - | |
Chy05g00369 | 430 | ProSiteProfiles | Protein kinase domain profile. | 25 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy05g00369 | 430 | Pfam | Protein kinase domain | 30 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy05g00369 | Chy06g00525 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy05g00369 | Chy-Chr5:3929425 | Chy08g00586 | Chy-Chr8:13578622 | 2.14E-129 | dispersed | |
Chy05g00369 | Chy-Chr5:3929425 | Chy06g00525 | Chy-Chr6:3562906 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71268 | PF00069 | Pkinase | 1.90E-72 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy05g00369 | K12761 | - | csv:101215156 | 830.861 |