Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00369 ATGGAGTCCGGTGGTCCGCCCACCCCTCCGCCGCTCCCTCCGCCGCCTACTGGCGCCACTCTCCTTGGCAAGTACCAATTAGGCCTTTTCCTCGGCCGTGGAAGCTTCGCCAAGGTCTATCAAGCTCGTTCTCTCGCCGATAACTCCATTGTCGCCGTCAAAATCATCGACAAGAACAAAACCATCGACGCCGCCATGGAACCCTGCATTGTCCGTGAGATCGCCGTGATGCGACGCCTTCAGCACCATCCCAACATCCTCAAAATCCATGAAGTTATGGCGACGAAAACGAAGATCTACCTCGTTGTCGATTACGCATCCGGTGGTGAACTATTCGCGAAACTCCTCCGCCGTGGTCGCTTAACGGAATCCACCGCTCGCCGTTACTTTCAACAATTAGTCTCTGCTCTTCATTTCTGTCATCAAAACGGCGTTGCTCATCGCGACATCAAACCCCAAAATCTCCTCCTCGATGAAGAAGGTAACCTAAAGGTCTCCGACTTCGGTCTCTCCGCTTTGCCGGAACAGATCAAAGACGGAATGCTTCACACCGCCTGTGGAACTCCGGCATACACCGCGCCAGAGGTTGTTTCCCGGCGAGGCTACGATGGGGCAAAAGCCGATGCGTGGTCCTGTGGTGTTATCCTCTTCGTTTTACTCTCCGGTCATCTTCCATTCAGCGATAACAACCTCGTCGCTATGTACAAGAAGGTTTATCGCCGGGAATATCAATTTCCCGATTCAATTTCAAAGCCAGCAAGACATTTGATCTTCCAATTACTGGATCCAAATCCACATACAAGGATGAGCATTGAGGCATTGATGCAACATTCATGGTACAAGAAATCATTGCGATCAAAGCCCCAAATTAGCAACAGGAGCTTATTTGATTCATTGGGTAATTACAAATCTGAATTGGGTGTTTCTGGATTGAATGCATTTGATATAATTTCAATGTCTTCTGGTTTAGATCTGTCTGGGTTGTTTGAAACAACAGATTGTAATAAGAAGAGATTCACAACAGGGGTTGGTATGGAGAAAGTGGAAGAAAGGGTAAGAGAGATTGGTGGAGAATTGGGTTATAGAGTTGAGAAAGGGAAAAGTGGGGCAATTGGGTTAGGGAAAGGGAGAATGATATTGGTGGTTGAAGCTTTGGAAATAACTTCAAATCTGTTAATGGTGGAAGTGAAGGTAGCTGAATCCAAGATGGAGTTTGAGAGGATGCATTGGGGAGATTTGAAAGCTAAGTTACAAGACATTGTTGATTCTTGGCATACAAATGAGGGAATGTAA 1293 47.1 MESGGPPTPPPLPPPPTGATLLGKYQLGLFLGRGSFAKVYQARSLADNSIVAVKIIDKNKTIDAAMEPCIVREIAVMRRLQHHPNILKIHEVMATKTKIYLVVDYASGGELFAKLLRRGRLTESTARRYFQQLVSALHFCHQNGVAHRDIKPQNLLLDEEGNLKVSDFGLSALPEQIKDGMLHTACGTPAYTAPEVVSRRGYDGAKADAWSCGVILFVLLSGHLPFSDNNLVAMYKKVYRREYQFPDSISKPARHLIFQLLDPNPHTRMSIEALMQHSWYKKSLRSKPQISNRSLFDSLGNYKSELGVSGLNAFDIISMSSGLDLSGLFETTDCNKKRFTTGVGMEKVEERVREIGGELGYRVEKGKSGAIGLGKGRMILVVEALEITSNLLMVEVKVAESKMEFERMHWGDLKAKLQDIVDSWHTNEGM* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3929425 3930717 - Chy5G094150.1 Chy05g00369 226596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00369 430 CDD CIPK_C 312 414 - -
Chy05g00369 430 SUPERFAMILY Protein kinase-like (PK-like) 22 288 IPR011009 -
Chy05g00369 430 Gene3D Kinase associated domain 1, KA1 308 422 - -
Chy05g00369 430 Gene3D Transferase(Phosphotransferase) domain 1 17 307 - -
Chy05g00369 430 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00369 430 PANTHER SERINE/THREONINE KINASE 16 427 - -
Chy05g00369 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Chy05g00369 430 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Chy05g00369 430 Pfam NAF domain 311 365 IPR004041 GO:0007165
Chy05g00369 430 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Chy05g00369 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 427 - -
Chy05g00369 430 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00369 430 Pfam Protein kinase domain 30 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00369 Chy06g00525 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00369 Chy-Chr5:3929425 Chy08g00586 Chy-Chr8:13578622 2.14E-129 dispersed
Chy05g00369 Chy-Chr5:3929425 Chy06g00525 Chy-Chr6:3562906 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71268 PF00069 Pkinase 1.90E-72 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00369 K12761 - csv:101215156 830.861