Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00486 ATGGCTTCTGAGTCTGGCAGTGTTGACTATACTCAACGTGCTCAGTGGCTCCGAGCAGCAATCCTAGGGGCCAACGATGGGCTCGTCTCTGTTGCGTCGCTCATGATGGGCGTCGGAGCCGTTAAGCCCGACGCCAAAGCCATGCTTATTGCTGGATTTGCAGGACTGGTTGCTGGAGCTTGTAGTATGGCGATAGGAGAGTTCGTCTCTGTTTACACTCAATATGACATTGAGAAAGCTCAGCTGAAGAGAAATGGGAAGGAAAAGAATAATAACATGGAACCAAACCACCCGGGTGAGGAGGAAGAGAAGCTGCCAAATCCACTACAGGCTGCGCTGGCATCGGCGATAGCGTTTTCGGTCGGAGCAGTCATTCCTTTGGTGGCAGCAGTGTTTATCCGAGACCATAAGGTGAGGCTGGGGGTCGTGGCAGCGGTGGCGAGCTTGACGCTGTTGGTTTTTGGGATAGTTGGAGCCATCTTGGGGAGAACTCCGGTTGGAAAATCAGCAGCAAGAGTGGTGGTTGGAGGGTGGATGGCTATGGCTCTTACTTTTGGCCTTACAAAGCTACTTGGGTCTAAGGGACTATGA 591 52.45 MASESGSVDYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRNGKEKNNNMEPNHPGEEEEKLPNPLQAALASAIAFSVGAVIPLVAAVFIRDHKVRLGVVAAVASLTLLVFGIVGAILGRTPVGKSAARVVVGGWMAMALTFGLTKLLGSKGL* 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5191715 5192408 + Chy5G095320.1 Chy05g00486 226713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00486 196 Pfam VIT family 17 93 IPR008217 GO:0005384|GO:0030026
Chy05g00486 196 Pfam VIT family 102 188 IPR008217 GO:0005384|GO:0030026
Chy05g00486 196 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 4 193 - -
Chy05g00486 196 MobiDBLite consensus disorder prediction 83 104 - -
Chy05g00486 196 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 4 193 IPR008217 GO:0005384|GO:0030026
Chy05g00486 196 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00517 Chy-Chr3:7146739 Chy05g00486 Chy-Chr5:5191715 8.17E-91 dispersed
Chy05g00486 Chy-Chr5:5191715 Chy10g00218 Chy-Chr10:5499648 1.00E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00486 K22736 - csv:101214875 347.051