Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00519 ATGACAATCGACCATATGTCCCATCAAACACGCACTTCCACCAGCATTAACGATGATGATTCCGACCATCTCCATCCTACTCTTCCCACGCCACTTGTCTCCAATGGCACGGACTACAATAATGCCGGAGATGACCTCTTTGTTCCTCCCTTGAACTTCGCTGTCGTTGACACCGGCATTTTTCGCTCTGGTTTCCCTGACTCTTCCAACTTCTCTTTCTTGCAGACATTAGGCCTTCGGTCTATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCTAGCATGGATTTCCTCAACTCCAATGGGATCCGATTGTTTCAATTTGGTATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATTTGAGCGCAGATCAAATGTACTATTTGGAGCCTTTTGTCAACATTCCAGACTACACGATTCGTGAAGTACTTAAAATTATTCTTGATGTGAGGAATCGACCGGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGATGTGTTGTGGGATGCTTTAGAAAGGTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTATCAGAGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGATTCATTGAACTATTCGACATTTCTGAGTTGAAGCTTTTGCCATCATCATTTTCATGCTCCGAAAGATAA 720 44.03 MTIDHMSHQTRTSTSINDDDSDHLHPTLPTPLVSNGTDYNNAGDDLFVPPLNFAVVDTGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDLSADQMYYLEPFVNIPDYTIREVLKIILDVRNRPVLIHCKRGKHRTGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISELKLLPSSFSCSER* 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5629593 5632015 - Chy5G095650.1 Chy05g00519 226746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00519 239 MobiDBLite consensus disorder prediction 1 30 - -
Chy05g00519 239 CDD PFA-DSP_Siw14 46 223 - -
Chy05g00519 239 ProSitePatterns Tyrosine specific protein phosphatases active site. 172 182 IPR016130 GO:0016311|GO:0016791
Chy05g00519 239 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 238 - -
Chy05g00519 239 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 224 IPR029021 -
Chy05g00519 239 ProSiteProfiles Dual specificity protein phosphatase domain profile. 52 236 IPR020422 GO:0006470|GO:0008138
Chy05g00519 239 Pfam Tyrosine phosphatase family 48 227 IPR004861 -
Chy05g00519 239 PRINTS Plant and fungal dual specificity phosphatase signature 150 164 IPR020428 GO:0016791
Chy05g00519 239 PRINTS Plant and fungal dual specificity phosphatase signature 47 64 IPR020428 GO:0016791
Chy05g00519 239 PRINTS Plant and fungal dual specificity phosphatase signature 84 97 IPR020428 GO:0016791
Chy05g00519 239 PRINTS Plant and fungal dual specificity phosphatase signature 103 117 IPR020428 GO:0016791
Chy05g00519 239 PANTHER - 1 238 - -
Chy05g00519 239 Gene3D Protein tyrosine phosphatase superfamily 46 226 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00519 Chy-Chr5:5629593 Chy11g00950 Chy-Chr11:13243491 2.22E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00519 K18045 - csv:101209768 406.371