Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00533 ATGGGGGACATATCTCAATCTCCAAATCGAATCGGAGCTGCCAAACTTCATTTCTTCTATGCAATTCTTCTGTTGCAGTTTGCTACCTTCGGATTAGCAGCCGCAGCCAAGCTTCATCGAGAAGAAGTGAAAGCGTTGAAAGAGATCGAGAAGAAATTAGGGAAAAAGGACTGGGATTTTAACATTGATCCTTGCAGTGGAGAAGGAAAATGGCACGTTGTTAATGGAAGAAAAGGGTTCGAAAGCTCTGTCACCTGTGATTGCTCGTTCAACCATAACTCCACTTGCCACATCGTCGCCATAGCTTTGAAGTCCCAGAATCTATCAGGCATTGTGCCACCAGAGTTTTCCAAGCTTCGGTTCCTCAAACAGCTAGATCTCAGTCGAAACTGCCTCACTGGTTTTGTTCCTTCACAATGGGCTACCATGCGATTGGTAGAACTCTCTTTCATGGGAAATAAATTGTCCGGGCCATTCCCGAAAGTTCTTACTAATATCACCACCCTCAGAAACTTGAGCATCGAAGGAAATCAATTTTCTGGCCGAATTCCACCAGAAATTGGAAAACTAGTTAATTTGGAAAAATTAGTTCTGTCATCAAATGGCCTCACCGGAGAATTGCCTAAAGGGCTAGCAAAATTGTCGAACTTAACTGATATGAGAATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAACTGGGCACAGATTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGTCCTATACCCTTAAGTATCTCCACAATGACAAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCGCCGTTGAGCAATATAAAATCCATGAAGACGCTGATACTGAGGAAGTGCTTCATTTTTGGTGAAATCCCGAAATACATCGGGGACATGAAAAAATTAAAAAACTTAGACCTCAGCTACAATGACTTGACTGGCGAAGTTCCTGCAACTTTTGAACGACTGGATAAAATAGATTACATCTTTTTGACAGCAAACAAGCTCAATGGAATTATTCCTGGTTGGATTTTAGGGAGCAACAAGAACGTAGATCTCTCTAACAACAATTTCACCTGGGAAAACTCAAGCCCAGCTGAGTGTCCTCGTGGTAGTGTAAATTTAGTTGAGACGTACTCACCGTCTGCAGAAAAATTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCCTGTTCTGCATCAAGGGAACAGCATCACTACTCCTTGCGCATTAACTGTGGCGGTAAAGAAACATTTATAAGGGGTGAAAGGTATGAAGCAGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACTGGAAGCTTTATGGACAATGATGTTGATGCTGATAACTACATCGTTACAAATACATCTGCTCTTTCTAACGTCTCTGCGAGTGATTCAGAACTGTATACAAAAGCGAGAAACTCTCCTCAATCTCTTACATACTATGGGCTATGTCTCATAAATGGGAATTATACTGTTAAACTCCACTTTGCAGAGATTGTTTTTATAAATGACAGTTCATTCAACAGCCTGGGGAGGCGAGTTTTTGATGTGTACATTCAGGAAAAGCTAGTCCTGAAAGATTTTGATATTGAACAAGAAGCAGGGGGTACAGGTAAGCCCATTATAAAAACATTTACTGTAGCTGTCACAAGTCATACATTGAAAATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATTCCACTTAGAGGAAATTATGGTCCTCTGATATCAGCTATTTCTTTAGATCCCAATTTTACACCCCCTAAAAACCATGGGAAGAAGGATTACACCGTCATAATTATTGGGACAACAGCAGCAGCTTTTGTTCTCCTTCTTCTGGTGTTATGTATTATGAGGAGGAAAGGGTGGCTGGGAGGCAAGGCATCCGTATATAAAGACACCTTAAGTTTGTTTCATTCAGAGCTTAGAGGTATAGATCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAATTTTGATGCTGCAAACAAAGTTGGTGAAGGTGGTTTTGGTGCGGTTTACAAGGGTCTCTTGTCAGATGGTACTATAATTGCAGTCAAGCAGCTGTCGTCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCTGCACTGCAACATCCAAATCTTGTGAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGGTTCTAAATTGAAGTTGGACTGGCCAACCAGGCAGAAAATTTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTGCATGAGGAGTCCAGACTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTGCTGCTTGATAAGGATTTCAGTGCTAAAATTTCTGATTTTGGCTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGTACTAGAGTTGCCGGAACCATTGGTTATATGGCACCTGAATATGCAATGCGTGGATGCTTGACCAGCAAAGCTGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATTGTCAGTGGCAAAAGCAATACCAACTACATGCCTAAAGAGGATTTTGTTTACCTTCTTGATTGGGCATCTGTTCTGCAAGAAAAAGGAAGTCTATTGGAGTTGGTGGATCCAGCCTTGGGGTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTTCGGCCTCTAATGTCGCAAGTGGTCAGCATGCTCGAAGGACGAACTCCAGTTCAAGCCCTTCTTTCTGATCCAGGATTTTCAGCCATCAATTCCAAATTGAAAGCTCTCAGAAATCACTTTTGGCAACAATTGAGCCCTACACACAGTTTATCATTGGACGATTTCCCTAGTGATTCGTTGAGTTCGAATGTGGATCTGGAGGCAGAGGAGAACTCTAATCTAGTAAGGTCCCATTCTATTAACAAAACTGGAATAAAAAATTAG 3111 41.08 MGDISQSPNRIGAAKLHFFYAILLLQFATFGLAAAAKLHREEVKALKEIEKKLGKKDWDFNIDPCSGEGKWHVVNGRKGFESSVTCDCSFNHNSTCHIVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGFVPSQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGRIPPEIGKLVNLEKLVLSSNGLTGELPKGLAKLSNLTDMRISDNNFSGKIPEFISNWAQIEKLHIQGCSLEGPIPLSISTMTSLTDLRISDLKGGRSPFPPLSNIKSMKTLILRKCFIFGEIPKYIGDMKKLKNLDLSYNDLTGEVPATFERLDKIDYIFLTANKLNGIIPGWILGSNKNVDLSNNNFTWENSSPAECPRGSVNLVETYSPSAEKLTRIHPCLKRNFPCSASREQHHYSLRINCGGKETFIRGERYEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIVTNTSALSNVSASDSELYTKARNSPQSLTYYGLCLINGNYTVKLHFAEIVFINDSSFNSLGRRVFDVYIQEKLVLKDFDIEQEAGGTGKPIIKTFTVAVTSHTLKIHFYWAGRGTTGIPLRGNYGPLISAISLDPNFTPPKNHGKKDYTVIIIGTTAAAFVLLLLVLCIMRRKGWLGGKASVYKDTLSLFHSELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPGSKLKLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFSAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTSKADVYSFGVVALEIVSGKSNTNYMPKEDFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQLSPTHSLSLDDFPSDSLSSNVDLEAEENSNLVRSHSINKTGIKN* 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5723517 5733367 + Chy5G095790.1 Chy05g00533 226760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00533 1036 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 74 1008 - -
Chy05g00533 1036 Pfam Malectin domain 420 603 IPR021720 -
Chy05g00533 1036 Pfam Protein tyrosine and serine/threonine kinase 691 904 IPR001245 GO:0004672|GO:0006468
Chy05g00533 1036 Gene3D Transferase(Phosphotransferase) domain 1 764 969 - -
Chy05g00533 1036 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 1008 - -
Chy05g00533 1036 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00533 1036 Gene3D - 416 606 - -
Chy05g00533 1036 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Chy05g00533 1036 CDD STKc_IRAK 694 962 - -
Chy05g00533 1036 Pfam Leucine Rich Repeat 312 334 IPR001611 GO:0005515
Chy05g00533 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Chy05g00533 1036 ProSiteProfiles Protein kinase domain profile. 688 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy05g00533 1036 SUPERFAMILY L domain-like 86 370 - -
Chy05g00533 1036 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Chy05g00533 1036 SUPERFAMILY Protein kinase-like (PK-like) 673 961 IPR011009 -
Chy05g00533 1036 Gene3D Ribonuclease Inhibitor 278 409 IPR032675 -
Chy05g00533 1036 Gene3D Ribonuclease Inhibitor 39 277 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00533 Chy-Chr5:5723517 Chy07g00970 Chy-Chr7:14325037 0 dispersed
Chy12g01128 Chy-Chr12:16253161 Chy05g00533 Chy-Chr5:5723517 1.65E-62 dispersed
Chy05g00533 Chy-Chr5:5723517 Chy07g00003 Chy-Chr7:47337 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71269 PF07714 PK_Tyr_Ser-Thr 1.80E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00533 - - csv:101219400 1995.7