Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy05g00551 ATGGGTGGAGATGGAAAGCTCTTTACATTGGCTGAAGTCTCTCAGCACAACAATCCCAAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGTGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGACGTGGGTCATAGTGAGAGCGCAAGAGAAATGATGAGCAAATACTACGTTGGAGAGATCGATATCTCGACAATCCCAGAACGGTTGACATACACAGGTCCAAAGCAACCTCATTACAATCAGGATAAGACAACCGAGTTCATTATTAAGCTCCTCCAGTTCATGGTTCCTCTCGCAATCTTGGGATTGGCGGTTGGTATCCGCTTTTACAACAAATCAAGCTGA 405 45.43 MGGDGKLFTLAEVSQHNNPKDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYVGEIDISTIPERLTYTGPKQPHYNQDKTTEFIIKLLQFMVPLAILGLAVGIRFYNKSS* 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5995328 5998123 - Chy5G095970.1 Chy05g00551 226778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy05g00551 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Chy05g00551 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Chy05g00551 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Chy05g00551 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Chy05g00551 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Chy05g00551 134 SMART Cyt_b5_2 8 81 IPR001199 -
Chy05g00551 134 Gene3D - 3 85 IPR036400 -
Chy05g00551 134 PANTHER BNAC04G43300D PROTEIN 1 132 - -
Chy05g00551 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Chy05g00551 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Chy05g00551 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Chy05g00551 134 PANTHER CYTOCHROME B5 1 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00719 Chy-Chr3:9661591 Chy05g00551 Chy-Chr5:5995328 2.56E-34 dispersed
Chy04g00851 Chy-Chr4:11107494 Chy05g00551 Chy-Chr5:5995328 2.14E-64 dispersed
Chy05g00551 Chy-Chr5:5995328 Chy09g01458 Chy-Chr9:16067861 7.47E-44 dispersed
Chy11g01672 Chy-Chr11:23206119 Chy05g00551 Chy-Chr5:5995328 9.90E-12 transposed
Chy05g00551 Chy-Chr5:5995328 Chy06g00372 Chy-Chr6:2493956 2.29E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy05g00551 K23490 - csv:101213506 271.937